RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 TNS1Q9HBL0 1735 aaKnown RBP-1.93□□□□□ -2.72
SSB-208ENST00000468600 TRGV1A0A0A0MS02 117 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 IFITM5A6NNB3 132 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 TCRBP04435 133 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 SPRR1BP22528 89 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 CSAG1Q6PB30 78 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 CST11Q9H112 138 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 FMN1Q68DA7 1419 aa-1.93□□□□□ -2.72
SSB-208ENST00000468600 MYO5AQ9Y4I1 1855 aaKnown RBP-1.94□□□□□ -2.72
SSB-208ENST00000468600 TRAV4A0A0B4J268 109 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 HIGD1CA8MV81 97 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 CALB1P05937 261 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 DIAPH2-AS1Q14236 149 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 IQCJQ1A5X6 159 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 BORCS7Q96B45 105 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 CMSS1Q9BQ75 279 aaKnown RBP-1.94□□□□□ -2.72
SSB-208ENST00000468600 COA4Q9NYJ1 87 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 VPS29Q9UBQ0 182 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 NUP98P52948 1817 aa-1.94□□□□□ -2.72
SSB-208ENST00000468600 AKAP9Q99996 3911 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 MAP3K5Q99683 1374 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 AFDNP55196 1824 aaKnown RBP-1.95□□□□□ -2.72
SSB-208ENST00000468600 A0A087WUJ7 227 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 SERPINA6P08185 405 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 IDO1P14902 403 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 NEDD8Q15843 81 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 FAM74A4Q5TZK3 123 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 ARL5BQ96KC2 179 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 AP1S3Q96PC3 154 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 TMEM242Q9NWH2 141 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 ASB4Q9Y574 426 aa-1.95□□□□□ -2.72
SSB-208ENST00000468600 SIPA1L2Q9P2F8 1722 aaPredicted RBP-1.96□□□□□ -2.72
SSB-208ENST00000468600 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.96□□□□□ -2.72
SSB-208ENST00000468600 GGCTO75223 188 aaKnown RBP-1.96□□□□□ -2.72
SSB-208ENST00000468600 HAMPP81172 84 aa-1.96□□□□□ -2.72
SSB-208ENST00000468600 AESQ08117 197 aa-1.96□□□□□ -2.72
SSB-208ENST00000468600 KLRD1Q13241 179 aa-1.96□□□□□ -2.72
SSB-208ENST00000468600 Q6ZRX8 168 aa-1.96□□□□□ -2.72
SSB-208ENST00000468600 PPP1R1CQ8WVI7 109 aa-1.96□□□□□ -2.72
SSB-208ENST00000468600 CACYBPQ9HB71 228 aaKnown RBP-1.96□□□□□ -2.72
SSB-208ENST00000468600 CLDN24A6NM45 220 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 OMPP47874 163 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 MT1HP80294 61 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 CNPY4Q8N129 248 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 CLDN22Q8N7P3 220 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 CEP164Q9UPV0 1460 aa-1.97□□□□□ -2.72
SSB-208ENST00000468600 COL12A1Q99715 3063 aa-1.97□□□□□ -2.73
SSB-208ENST00000468600 MAP2P11137 1827 aaKnown RBP-1.98□□□□□ -2.73
SSB-208ENST00000468600 ANK3Q12955 4377 aaKnown RBP-1.98□□□□□ -2.73
SSB-208ENST00000468600 PLXNA1Q9UIW2 1896 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 TRBV19A0A075B6N1 114 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 LOC107984640A0A0U1RRK4 108 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 NPFFO15130 113 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 CRHP06850 196 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 GLRXP35754 106 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 H3F3AP84243 136 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 HACD4Q5VWC8 232 aa-1.98□□□□□ -2.73
SSB-208ENST00000468600 MRPL36Q9P0J6 103 aaKnown RBP-1.98□□□□□ -2.73
SSB-208ENST00000468600 IGF2P01344 180 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 COX6B1P14854 86 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 PHBP35232 272 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 MYL6P60660 151 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 IMPG1Q17R60 797 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 GOLT1AQ6ZVE7 132 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 TMEM141Q96I45 108 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 LINC00472Q9H8W2 130 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 PARVBQ9HBI1 364 aa-1.99□□□□□ -2.73
SSB-208ENST00000468600 VPS13BQ7Z7G8 4022 aa-2□□□□□ -2.73
SSB-208ENST00000468600 GCN1Q92616 2671 aaKnown RBP-2□□□□□ -2.73
SSB-208ENST00000468600 TRPM7Q96QT4 1865 aa-2□□□□□ -2.73
SSB-208ENST00000468600 SSC5DA1L4H1 1573 aa-2□□□□□ -2.73
SSB-208ENST00000468600 FAM25EA8MYX2 175 aa-2□□□□□ -2.73
SSB-208ENST00000468600 LYRM1O43325 122 aa-2□□□□□ -2.73
SSB-208ENST00000468600 PDE6DO43924 150 aa-2□□□□□ -2.73
SSB-208ENST00000468600 VMA21Q3ZAQ7 101 aa-2□□□□□ -2.73
SSB-208ENST00000468600 C3orf62Q6ZUJ4 267 aa-2□□□□□ -2.73
SSB-208ENST00000468600 BET1LQ9NYM9 111 aa-2□□□□□ -2.73
SSB-208ENST00000468600 DNAH9Q9NYC9 4486 aa-2□□□□□ -2.73
SSB-208ENST00000468600 ITPR1Q14643 2758 aa-2□□□□□ -2.73
SSB-208ENST00000468600 KIF1BO60333 1816 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 TSC2P49815 1807 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 ABCA13Q86UQ4 5058 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 TRPM1Q7Z4N2 1603 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 CST8O60676 142 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 IFNA16P05015 189 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 COX4I1P13073 169 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 S100A3P33764 101 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 TAS2R41P59536 307 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 EMX2Q04743 252 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 DEFB105AQ8NG35 78 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 OR4C12Q96R67 309 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 TP53AIP1Q9HCN2 124 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 BATF3Q9NR55 127 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 GUCA1BQ9UMX6 200 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 KIDINS220Q9ULH0 1771 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 CPDO75976 1380 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 PIK3C2GO75747 1445 aa-2.01□□□□□ -2.73
SSB-208ENST00000468600 FRMPD1Q5SYB0 1578 aa-2.02□□□□□ -2.73
SSB-208ENST00000468600 PLXNB2O15031 1838 aa-2.02□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms