RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TSPOP30536 169 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 POLR2IP36954 125 aaKnown RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 HNRNPA3P51991 378 aaKnown RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 RPS11P62280 158 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 SRSF9Q13242 221 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 NEDD8Q15843 81 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 OCIAD2Q56VL3 154 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 C1orf100Q5SVJ3 147 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF705AQ6ZN79 300 aaPredicted RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 HOGA1Q86XE5 327 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 BAP18Q8IXM2 172 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 FAM24BQ8N5W8 94 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 BEST4Q8NFU0 473 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 OR10G7Q8NGN6 311 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 ZFAND1Q8TCF1 268 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 SEC22AQ96IW7 307 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 CYYR1Q96J86 154 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 HSD17B10Q99714 261 aaKnown RBP3.76□□□□□ -1.81
PTCD3-207ENST00000467273 BET1LQ9NYM9 111 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 AK3Q9UIJ7 227 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 RAB22AQ9UL26 194 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 RFNGQ9Y644 331 aa3.76□□□□□ -1.81
PTCD3-207ENST00000467273 K7EQG2 157 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF207O43670 478 aaKnown RBP3.75□□□□□ -1.81
PTCD3-207ENST00000467273 CDS2O95674 445 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 IGKV3-20P01619 116 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 PRSS1P07477 247 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
PTCD3-207ENST00000467273 QRFPP83859 136 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 KIAA1644Q3SXP7 199 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 XAF1Q6GPH4 301 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 ZNF773Q6PK81 442 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 Q6ZS49 121 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 NEGR1Q7Z3B1 354 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 CBR4Q8N4T8 237 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 DEFB104AQ8WTQ1 72 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 CYGBQ8WWM9 190 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 DERL3Q96Q80 235 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 GINS4Q9BRT9 223 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-207ENST00000467273 COMMD5Q9GZQ3 224 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 ANXA10Q9UJ72 324 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 PRNDQ9UKY0 176 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 ZFP30Q9Y2G7 519 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 ORC6Q9Y5N6 252 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 U3KQ87 197 aa3.75□□□□□ -1.81
PTCD3-207ENST00000467273 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 A0A0U1RQV1 116 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 A0A1B0GX51 115 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 M0R143 59 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 RBFOX2O43251 390 aaKnown RBP eCLIP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 YIF1AO95070 293 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 IGLV2-11P01706 119 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 CRHBPP24387 322 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 RND3P61587 244 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 DAD1P61803 113 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 TIMM50Q3ZCQ8 353 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 Q56UQ5 140 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 FAM222AQ5U5X8 452 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 MRPL55Q7Z7F7 128 aaKnown RBP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 LINC01551Q86U37 167 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 H1FOOQ8IZA3 346 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 C8orf59Q8N0T1 100 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 TERB2Q8NHR7 220 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 GPR82Q96P67 336 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 UPK3BQ9BT76 320 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 TMEM70Q9BUB7 260 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 LPAR5Q9H1C0 372 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 SH3BGRL3Q9H299 93 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 LYRM2Q9NU23 88 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 RABAC1Q9UI14 185 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 PKIGQ9Y2B9 76 aa3.74□□□□□ -1.81
PTCD3-207ENST00000467273 F11RQ9Y624 299 aaKnown RBP3.74□□□□□ -1.81
PTCD3-207ENST00000467273 IRGMA1A4Y4 181 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 J3KT08 172 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 K7EIM0 57 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 SOCS1O15524 211 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 GNG7O60262 68 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 HLA-DQB1P01920 261 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 FCGR3AP08637 254 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 TRAPPC2P0DI81 140 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 TRAPPC2BP0DI82 140 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 HTN3P15516 51 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 PSMB9P28065 219 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 EMP1P54849 157 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 GNG5P63218 68 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 MSMO1Q15800 293 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 IAH1Q2TAA2 248 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-207ENST00000467273 HSD17B12Q53GQ0 312 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 TEX261Q6UWH6 196 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 GOLT1AQ6ZVE7 132 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 OR1S1Q8NH92 325 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 RHOXF1Q8NHV9 184 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 DCANP1Q8TF63 244 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 ORAOV1Q8WV07 137 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 ARHGAP5-AS1Q96IT6 56 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 CNBD2Q96M20 576 aa3.73□□□□□ -1.81
PTCD3-207ENST00000467273 RTBDNQ9BSG5 229 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-207ENST00000467273 EHFQ9NZC4 300 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms