RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 NDUFB4O95168 129 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
VARS-221ENST00000463184 LINC00612Q8N6U2 182 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 RXFP4Q8TDU9 374 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 Q9H3A6 140 aa13.74□□□□□ -0.21
VARS-221ENST00000463184 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
VARS-221ENST00000463184 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
VARS-221ENST00000463184 SLC51BQ86UW2 128 aa13.73□□□□□ -0.21
VARS-221ENST00000463184 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
VARS-221ENST00000463184 UPK3BQ9BT76 320 aa13.73□□□□□ -0.21
VARS-221ENST00000463184 PRELID1Q9Y255 219 aa13.73□□□□□ -0.21
VARS-221ENST00000463184 CTXND1A0A1B0GTU2 59 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 A0A1W2PPQ1 181 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 UMAD1C9J7I0 102 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 BTF3P20290 206 aaKnown RBP13.72□□□□□ -0.21
VARS-221ENST00000463184 LYPD1Q8N2G4 141 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 MRPL53Q96EL3 112 aaKnown RBP13.72□□□□□ -0.21
VARS-221ENST00000463184 AAMDCQ9H7C9 122 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 SCRT2Q9NQ03 307 aa13.72□□□□□ -0.21
VARS-221ENST00000463184 H3BNG1 76 aa13.71□□□□□ -0.21
VARS-221ENST00000463184 CXorf1O96002 111 aa13.71□□□□□ -0.21
VARS-221ENST00000463184 ARL14EPLP0DKL9 152 aa13.71□□□□□ -0.21
VARS-221ENST00000463184 PRB4P10163 310 aaPredicted RBP13.71□□□□□ -0.21
VARS-221ENST00000463184 ZNF726P1Q15940 193 aa13.71□□□□□ -0.21
VARS-221ENST00000463184 EIF5AL1Q6IS14 154 aaKnown RBP13.71□□□□□ -0.21
VARS-221ENST00000463184 KRTAP1-5Q9BYS1 174 aa13.71□□□□□ -0.21
VARS-221ENST00000463184 APOBP04114 4563 aaKnown RBP13.7□□□□□ -0.22
VARS-221ENST00000463184 A0A0J9YY99 117 aa13.7□□□□□ -0.22
VARS-221ENST00000463184 KIR3DS1Q14943 382 aa13.7□□□□□ -0.22
VARS-221ENST00000463184 ESRGQ1W209 222 aa13.7□□□□□ -0.22
VARS-221ENST00000463184 EXOC3-AS1Q8N2X6 119 aa13.7□□□□□ -0.22
VARS-221ENST00000463184 PHYHIPLQ96FC7 376 aa13.7□□□□□ -0.22
VARS-221ENST00000463184 GCHFRP30047 84 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 RANP62826 216 aaKnown RBP13.69□□□□□ -0.22
VARS-221ENST00000463184 ICAM4Q14773 271 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 DPPA3Q6W0C5 159 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 SUN5Q8TC36 379 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 TMED6Q8WW62 240 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 TMEM167BQ9NRX6 74 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 DNAH5Q8TE73 4624 aa13.69□□□□□ -0.22
VARS-221ENST00000463184 GAGE12BA1L429 117 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 SNURFLB1AK76 121 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 GAGE7O76087 117 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 HOXA5P20719 270 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 NKX2-5P52952 324 aaPredicted RBP13.68□□□□□ -0.22
VARS-221ENST00000463184 KRTAP10-2P60368 255 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 GFI1BQ5VTD9 330 aa13.68□□□□□ -0.22
VARS-221ENST00000463184 MRPS16Q9Y3D3 137 aaKnown RBP13.68□□□□□ -0.22
VARS-221ENST00000463184 PRAC2D3DTV9 90 aa13.67□□□□□ -0.22
VARS-221ENST00000463184 M0R3E3 92 aa13.67□□□□□ -0.22
VARS-221ENST00000463184 OTORQ9NRC9 128 aa13.67□□□□□ -0.22
VARS-221ENST00000463184 MAP1LC3B2A6NCE7 125 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 FHITP49789 147 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 RAB5CP51148 216 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 FAM74A1Q5RGS3 127 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 FAM213BQ8TBF2 198 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 MAP1LC3BQ9GZQ8 125 aa13.66□□□□□ -0.22
VARS-221ENST00000463184 PGPA6NDG6 321 aa13.65□□□□□ -0.22
VARS-221ENST00000463184 CSN1S1P47710 185 aa13.65□□□□□ -0.22
VARS-221ENST00000463184 DAZ2Q13117 558 aaKnown RBP13.65□□□□□ -0.22
VARS-221ENST00000463184 IQCF2Q8IXL9 164 aa13.65□□□□□ -0.22
VARS-221ENST00000463184 MBD3L1Q8WWY6 194 aa13.65□□□□□ -0.22
VARS-221ENST00000463184 ODF3Q96PU9 254 aa13.65□□□□□ -0.22
VARS-221ENST00000463184 LEPP41159 167 aa13.64□□□□□ -0.23
VARS-221ENST00000463184 FGF8P55075 233 aaPredicted RBP13.64□□□□□ -0.23
VARS-221ENST00000463184 PYGO2Q9BRQ0 406 aa13.64□□□□□ -0.23
VARS-221ENST00000463184 NPIPB6E9PJ23 425 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 SULT1A2P50226 295 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 ARL6IP6Q8N6S5 226 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 CMTM2Q8TAZ6 248 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 SFT2D1Q8WV19 159 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 TMPRSS5Q9H3S3 457 aa13.63□□□□□ -0.23
VARS-221ENST00000463184 TRAV12-3A0A0B4J271 114 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 J3KRW8 73 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 H2AFB1P0C5Y9 115 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 CT45A10P0DMU9 189 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 BOLA1Q9Y3E2 137 aa13.62□□□□□ -0.23
VARS-221ENST00000463184 A0A096LPF7 62 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 A0A1W2PRE2 83 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 RBAKDNA6NC62 111 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 C9orf47Q6ZRZ4 202 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 Q6ZTI0 123 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 VSIG2Q96IQ7 327 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
VARS-221ENST00000463184 TRGV2A0A075B6R0 118 aa13.6□□□□□ -0.23
VARS-221ENST00000463184 IGKV2-40A0A087WW87 121 aaPredicted RBP13.6□□□□□ -0.23
VARS-221ENST00000463184 DIRC3C9JPN6 131 aa13.6□□□□□ -0.23
VARS-221ENST00000463184 IGKV2D-40P01614 121 aaPredicted RBP13.6□□□□□ -0.23
VARS-221ENST00000463184 SLC25A5P05141 298 aaKnown RBP13.6□□□□□ -0.23
VARS-221ENST00000463184 LINC00315P59091 139 aa13.6□□□□□ -0.23
VARS-221ENST00000463184 ERCC8Q13216 396 aa13.6□□□□□ -0.23
VARS-221ENST00000463184 AGPAT4-IT1Q9H0P7 198 aa13.6□□□□□ -0.23
VARS-221ENST00000463184 SUMO1P63165 101 aaKnown RBP13.59□□□□□ -0.23
VARS-221ENST00000463184 TMEM78Q5T7P6 136 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms