RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 A0A1B0GUT8 65 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 NPIPB6E9PJ23 425 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 F6UB75 175 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 SOCS3O14543 225 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 PHOX2AO14813 284 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 GPX1P07203 203 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 FABP4P15090 132 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 SRIP30626 198 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 CRIP1P50238 77 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 ZNF80P51504 273 aaPredicted RBP5.14□□□□□ -1.59
MSH2-204ENST00000461394 HILS1P60008 231 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 DEFB1P60022 68 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 PRR31Q5SQ13 230 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 GFI1BQ5VTD9 330 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 EBLN2Q6P2I7 272 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 C9orf47Q6ZRZ4 202 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 HIST3H2BBQ8N257 126 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 FER1L6-AS1Q8NA97 138 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 OR8A1Q8NGG7 326 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 WIPF2Q8TF74 440 aaPredicted RBP5.14□□□□□ -1.59
MSH2-204ENST00000461394 GTSF1Q8WW33 167 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 C1orf43Q9BWL3 253 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 TIMM8BQ9Y5J9 83 aaPredicted RBP5.14□□□□□ -1.59
MSH2-204ENST00000461394 TSSC4Q9Y5U2 329 aaPredicted RBP5.14□□□□□ -1.59
MSH2-204ENST00000461394 CSPG4Q6UVK1 2322 aa5.14□□□□□ -1.59
MSH2-204ENST00000461394 CELSR2Q9HCU4 2923 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 MUC21A0A0G2JKD1 596 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 MUC21A0A140T8X8 626 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 INAFM1C9JVW0 142 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 TCF21O43680 179 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 IGKV3-20P01619 116 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 ARMS2P0C7Q2 107 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 RNASE4P34096 147 aaKnown RBP5.13□□□□□ -1.59
MSH2-204ENST00000461394 KLF5Q13887 457 aaPredicted RBP5.13□□□□□ -1.59
MSH2-204ENST00000461394 NSUN5P1Q3KNT7 163 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 MUC21Q5SSG8 566 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 LYZL1Q6UWQ5 148 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 OR10D4PQ8NGN7 298 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 OR9G4Q8NGQ1 327 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 LINC01006Q8NI28 216 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 DLX4Q92988 240 aaPredicted RBP5.13□□□□□ -1.59
MSH2-204ENST00000461394 TMEM18Q96B42 140 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 CITED2Q99967 270 aaPredicted RBP5.13□□□□□ -1.59
MSH2-204ENST00000461394 C16orf95Q9H693 158 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 RNF114Q9Y508 228 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 LENEPQ9Y5L5 61 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 NAV2Q8IVL1 2488 aa5.13□□□□□ -1.59
MSH2-204ENST00000461394 TRAV21A0A0B4J279 112 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 A0A1B0GUS0 222 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 A0A1B0GW15 77 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 A0A1B0GXF2 115 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 K7EQG2 157 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 CCL24O00175 119 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 DUSP14O95147 198 aaKnown RBP5.12□□□□□ -1.59
MSH2-204ENST00000461394 S100A4P26447 101 aaKnown RBP5.12□□□□□ -1.59
MSH2-204ENST00000461394 LEPP41159 167 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 SLAQ13239 276 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 KIR3DS1Q14943 382 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 TWIST1Q15672 202 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 GDF5OSQ5U4N7 250 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 COX8CQ7Z4L0 72 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 DCANP1Q8TF63 244 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 C12orf57Q99622 126 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 SAMD10Q9BYL1 202 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 APCP25054 2843 aa5.12□□□□□ -1.59
MSH2-204ENST00000461394 ABCA12Q86UK0 2595 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 ASH1LQ9NR48 2969 aaKnown RBP5.11□□□□□ -1.59
MSH2-204ENST00000461394 PTPN13Q12923 2485 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 SERF1AO75920 110 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 NDUFA7O95182 113 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 CSN3P07498 182 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 IQCJQ1A5X6 159 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 OR10J3Q5JRS4 329 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 RNASEKQ6P5S7 137 aaKnown RBP5.11□□□□□ -1.59
MSH2-204ENST00000461394 SMIM15Q7Z3B0 74 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 LINC00518Q8N0U6 118 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 TMEM256Q8N2U0 113 aa5.11□□□□□ -1.59
MSH2-204ENST00000461394 PACRGQ96M98 296 aaPredicted RBP5.11□□□□□ -1.59
MSH2-204ENST00000461394 CHD6Q8TD26 2715 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 A0A087WWL8 130 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 LOC102724200A0A096LPH7 203 aaPredicted RBP5.1□□□□□ -1.59
MSH2-204ENST00000461394 OR4C46A6NHA9 309 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 F2Z2F3 143 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 H3BVH4 76 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 AMBPP02760 352 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 SMIM6P0DI80 62 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 FOSL1P15407 271 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 BTF3P20290 206 aaKnown RBP5.1□□□□□ -1.59
MSH2-204ENST00000461394 PMCHP20382 165 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 NTF3P20783 257 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 TSPOP30536 169 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 ASIPP42127 132 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 FOXA3P55318 350 aaPredicted RBP5.1□□□□□ -1.59
MSH2-204ENST00000461394 DEFB131AP59861 70 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 Q0VG73 95 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 COA6Q5JTJ3 125 aaKnown RBP5.1□□□□□ -1.59
MSH2-204ENST00000461394 PRR9Q5T870 116 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 SPANXN1Q5VSR9 72 aa5.1□□□□□ -1.59
MSH2-204ENST00000461394 KCNS1Q96KK3 526 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms