RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 HLA-DRB4X5D2U9 266 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 IGKV3-7A0A075B6H7 116 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 PRTN3P24158 256 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 HLA-DMBP28068 263 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 FHL3Q13643 280 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 SIGLEC15Q6ZMC9 328 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 ZNF493Q6ZR52 646 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 HIF1ANQ9NWT6 349 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 TM4SF5O14894 197 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 VKORC1Q9BQB6 163 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 C1QTNF4Q9BXJ3 329 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 PRO0461Q9UI25 63 aa9.78□□□□□ -0.84
AGRN-203ENST00000461111 IGLV2-23P01705 113 aa9.77□□□□□ -0.84
AGRN-203ENST00000461111 ZNF80P51504 273 aaPredicted RBP9.77□□□□□ -0.84
AGRN-203ENST00000461111 AKAP13Q12802 2813 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 H7C2G1 150 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 SPRY2O43597 315 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 ADIPOQQ15848 244 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 CTSZQ9UBR2 303 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 U3KQK5 164 aa9.77□□□□□ -0.85
AGRN-203ENST00000461111 PTPRQQ9UMZ3 2332 aa9.76□□□□□ -0.85
AGRN-203ENST00000461111 PRSS33Q8NF86 280 aa9.76□□□□□ -0.85
AGRN-203ENST00000461111 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
AGRN-203ENST00000461111 CHD8Q9HCK8 2581 aa9.76□□□□□ -0.85
AGRN-203ENST00000461111 IGKV1-17P01599 117 aa9.76□□□□□ -0.85
AGRN-203ENST00000461111 SMCPP49901 116 aaPredicted RBP9.76□□□□□ -0.85
AGRN-203ENST00000461111 TEX29Q8N6K0 151 aa9.76□□□□□ -0.85
AGRN-203ENST00000461111 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 ATP5LO75964 103 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 CRYGCP07315 174 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 ARL3P36405 182 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 PAX8Q06710 450 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 ERCC8Q13216 396 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
AGRN-203ENST00000461111 EMP1P54849 157 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 KLRD1Q13241 179 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 GFRALQ6UXV0 394 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 C1orf122Q6ZSJ8 110 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 SMIM20Q8N5G0 67 aa9.75□□□□□ -0.85
AGRN-203ENST00000461111 SHISA2Q6UWI4 295 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 SHANK2-AS3Q9BTD1 123 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
AGRN-203ENST00000461111 ERG28Q9UKR5 140 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 TMEM178BH3BS89 294 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 TIMM23O14925 209 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 IGLV3-9A0A075B6K5 115 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 HERV-K104P63124 156 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 GAGE5Q13069 117 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 GAGE6Q13070 117 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 MORN3Q6PF18 240 aaPredicted RBP9.74□□□□□ -0.85
AGRN-203ENST00000461111 DTX2Q86UW9 622 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 RNF185Q96GF1 192 aa9.74□□□□□ -0.85
AGRN-203ENST00000461111 C3orf56Q8N813 242 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 RAXQ9Y2V3 346 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 ZNF815PA8K554 130 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 SCGB2A1O75556 95 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 TRGV3P03979 118 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 LOXP28300 417 aaPredicted RBP9.73□□□□□ -0.85
AGRN-203ENST00000461111 PRR25Q96S07 402 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 TMEM14CQ9P0S9 112 aa9.73□□□□□ -0.85
AGRN-203ENST00000461111 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 CARD19Q96LW7 228 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 MYMXA0A1B0GTQ4 84 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
AGRN-203ENST00000461111 CFAP126Q5VTH2 177 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 ZMAT4Q9H898 229 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 ZNF883P0CG24 379 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 ECSCRQ19T08 205 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 CFAP161Q6P656 301 aa9.72□□□□□ -0.85
AGRN-203ENST00000461111 MBD3L4A6NDZ8 208 aaPredicted RBP9.71□□□□□ -0.85
AGRN-203ENST00000461111 MBD3L3A6NE82 208 aaPredicted RBP9.71□□□□□ -0.85
AGRN-203ENST00000461111 MBD3L5A6NJ08 208 aaPredicted RBP9.71□□□□□ -0.85
AGRN-203ENST00000461111 MBD3L2Q8NHZ7 208 aaPredicted RBP9.71□□□□□ -0.85
AGRN-203ENST00000461111 PTPN13Q12923 2485 aa9.71□□□□□ -0.85
AGRN-203ENST00000461111 FCN3O75636 299 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 TSPAN13O95857 204 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 GATD1Q8NB37 220 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 RNASE6Q93091 150 aaKnown RBP9.71□□□□□ -0.86
AGRN-203ENST00000461111 SLC25A16P16260 332 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
AGRN-203ENST00000461111 GATA4P43694 442 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 SRSF1Q07955 248 aaKnown RBP eCLIP9.71□□□□□ -0.86
AGRN-203ENST00000461111 LAGE3Q14657 143 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 SCGB3A1Q96QR1 104 aa9.71□□□□□ -0.86
AGRN-203ENST00000461111 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
AGRN-203ENST00000461111 INS-IGF2F8WCM5 200 aa9.7□□□□□ -0.86
AGRN-203ENST00000461111 C5orf64Q2M2E5 130 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms