RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RAB5BP61020 215 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 KRTAP24-1Q3LI83 254 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 CT83Q5H943 113 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 PRR31Q5SQ13 230 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 MORN3Q6PF18 240 aaPredicted RBP4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 TMEM256Q8N2U0 113 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 FAM24BQ8N5W8 94 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 LINC00482Q8N8I6 264 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 TSKUQ8WUA8 353 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 FRZBQ92765 325 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 FAM210BQ96KR6 192 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGF2BP2-AS1Q96M15 143 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 C20orf144Q9BQM9 153 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 RNASE7Q9H1E1 156 aaKnown RBP4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 SELENOKQ9Y6D0 94 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 TACC2O95359 2948 aa4.39□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRBV20OR9-2A0A075B6H5 130 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRGV11A0A075B6L2 103 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRAV8-2A0A0B4J237 113 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 C7orf71A4D174 169 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 SOCS3O14543 225 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 INSP01308 110 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZNF705DP0CH99 300 aaPredicted RBP4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZNF705BP0CI00 300 aaPredicted RBP4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 SMIM17P0DL12 118 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 HLA-DRB4P13762 266 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 HTN1P15515 57 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 ASIPP42127 132 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 APOC4P55056 127 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 FAM3BP58499 235 aaPredicted RBP4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 SPANXN1Q5VSR9 72 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 FER1L6-AS1Q8NA97 138 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 SYT8Q8NBV8 401 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 Q8TAT8 98 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZC2HC1AQ96GY0 325 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 C8orf49Q96NF6 230 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 MLST8Q9BVC4 326 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 MAP6D1Q9H9H5 199 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 GOLT1BQ9Y3E0 138 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRAPPC1Q9Y5R8 145 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 HLA-DRB4X5D2U9 266 aa4.38□□□□□ -1.71
RNU1-88P-201ENST00000459274 SMG1Q96Q15 3661 aaKnown RBP4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRAV12-3A0A0B4J271 114 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 A0A1B0GUT8 65 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 CBY3A6NI87 242 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 ADARB2-AS1A8MUL3 147 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 HIGD1CA8MV81 97 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 PRAC2D3DTV9 90 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 F6UB75 175 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 K7EN84 100 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 SH2D1AO60880 128 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 SCO1O75880 301 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGLV2-11P01706 119 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 HLA-DQA1P01909 254 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 CD7P09564 240 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRGC1P0CF51 173 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 RAB5AP20339 215 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TCL1AP56279 114 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 CACNG7P62955 275 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TWIST1Q15672 202 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 SPINK13Q1W4C9 94 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 ATP5L2Q7Z4Y8 100 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 PGLYRP4Q96LB8 373 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 C20orf173Q96LM9 149 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 CLUHP3Q96NS8 147 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 LINC01587Q99440 93 aa4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZNF256Q9Y2P7 627 aaPredicted RBP4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 TIMM8BQ9Y5J9 83 aaPredicted RBP4.37□□□□□ -1.71
RNU1-88P-201ENST00000459274 SORL1Q92673 2214 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRBV24-1A0A075B6N3 115 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 SMIM27A0A1W2PRY6 76 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 C19orf71A6NCJ1 209 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 KNCNA6PVL3 124 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 H3BMM0 161 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 SPINK4O60575 86 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGLV2-8P01709 118 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 CRISP2P16562 243 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 EDN2P20800 178 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 RIPPLY3P57055 190 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 KRTAP10-3P60369 221 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 HBBP68871 147 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 ELOBQ15370 118 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 LINC01559Q495D7 138 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 HIST2H2BDQ6DRA6 164 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 ATRAIDQ6UW56 229 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 COX8CQ7Z4L0 72 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 APRG1Q8IVJ8 170 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 Q8N3U1 123 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 WFDC9Q8NEX5 89 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 NEU1Q99519 415 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 PYGO2Q9BRQ0 406 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 V9GYV3 84 aa4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 MAP1AP78559 2803 aaPredicted RBP4.36□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGHV3OR16-12A0A075B7B8 117 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGHV1OR15-1A0A075B7D0 117 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 LOC102724200A0A096LPH7 203 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms