RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 OR4X2Q8NGF9 303 aa8.38□□□□□ -1.07
RFX3-211ENST00000458034 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
RFX3-211ENST00000458034 C10orf105Q8TEF2 133 aa8.38□□□□□ -1.07
RFX3-211ENST00000458034 SMPXQ9UHP9 88 aa8.38□□□□□ -1.07
RFX3-211ENST00000458034 BOD1L1Q8NFC6 3051 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 IGHV3OR16-13A0A075B7E8 117 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 IGHV3-49A0A0A0MS15 119 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 IGHV3-74A0A0B4J1X5 117 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 TRAV21A0A0B4J279 112 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 A0A0G2JLM5 398 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 A6NDN8 102 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 A6NDX4 124 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 PRSS47A8MTI9 375 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 SMAD7O15105 426 aaKnown RBP8.37□□□□□ -1.07
RFX3-211ENST00000458034 IGHG2P01859 326 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 MED14OSP0DP75 135 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 UQCRFS1P47985 274 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 SPANXN1Q5VSR9 72 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 PIFOQ8TCI5 191 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 MRAP2Q96G30 205 aa8.37□□□□□ -1.07
RFX3-211ENST00000458034 IGHV3OR16-10A0A075B7F0 116 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 IGHV4-61A0A0C4DH41 118 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 IGHV7-4-1A0A0J9YVY3 117 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 TRBV7-9A0A0J9YWB2 115 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 A1L4Q6 167 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 TAX1BP3O14907 124 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 PPIFP30405 207 aaKnown RBP8.36□□□□□ -1.07
RFX3-211ENST00000458034 HSD52Q0P140 79 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 C2orf91Q6ZV80 131 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 ZNF575Q86XF7 245 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 OR4C5Q8NGB2 326 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 MSRB1Q9NZV6 116 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 PEF1Q9UBV8 284 aaKnown RBP8.36□□□□□ -1.07
RFX3-211ENST00000458034 UFC1Q9Y3C8 167 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 SPTA1P02549 2419 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
RFX3-211ENST00000458034 PF4V1P10720 104 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 FGF6P10767 208 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 EVI2AP22794 236 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 DSCR9P59020 149 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 LAGE3Q14657 143 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 BRD3OSQ6XYD6 125 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 MYOZ3Q8TDC0 251 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 CBY1Q9Y3M2 126 aa8.35□□□□□ -1.07
RFX3-211ENST00000458034 H3BUX3 64 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 CCL25O15444 150 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 IGKCP01834 107 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 PRSS1P07477 247 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 MSMBP08118 114 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 GATA3P23771 443 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 ASIPP42127 132 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 ATP5J2P56134 94 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 FOXE3Q13461 319 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 LY6EQ16553 131 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 TMEM158Q8WZ71 300 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 AP1S3Q96PC3 154 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 C11orf21Q9P2W6 132 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
RFX3-211ENST00000458034 HIVEP3Q5T1R4 2406 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 IGLV2-18A0A075B6J9 118 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 CBY3A6NI87 242 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 H3BVH4 76 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 K7EMI3 77 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 SOCS3O14543 225 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 DPM2O94777 84 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 PPP1R17O96001 155 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 S100A4P26447 101 aaKnown RBP8.33□□□□□ -1.08
RFX3-211ENST00000458034 ID1P41134 155 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 FXYD7P58549 80 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 SRSF1Q07955 248 aaKnown RBP eCLIP8.33□□□□□ -1.08
RFX3-211ENST00000458034 ODF1Q14990 250 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 NRACQ8N912 160 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 C20orf173Q96LM9 149 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 ZMAT4Q9H898 229 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 TP73-AS1Q9UF72 201 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 HLA-DRB4X5D2U9 266 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 COL6A6A6NMZ7 2263 aa8.33□□□□□ -1.08
RFX3-211ENST00000458034 TMEM8BA6NDV4 472 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 H3BRM9 83 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 K7EMT4 169 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 K7EP13 123 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 M0R381 172 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 IGHV4-38-2P0DP08 117 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 NMUP48645 174 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 KIR3DS1Q14943 382 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 ORMDL2Q53FV1 153 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 FOXC2Q99958 501 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 DPH3P1Q9H4G8 78 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 HIGD1BQ9P298 99 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 ASPMQ8IZT6 3477 aa8.32□□□□□ -1.08
RFX3-211ENST00000458034 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 C7orf71A4D174 169 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 B4DSR2 109 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms