RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SCO1O75880 301 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 C1QBP02746 253 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 NEGR1Q7Z3B1 354 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 TM2D2Q9BX73 214 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 PPP1R2P9O14990 202 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 IBA57Q5T440 356 aaKnown RBP6.4□□□□□ -1.38
HCG18-238ENST00000449544 TCTE3Q8IZS6 198 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 FER1L6-AS1Q8NA97 138 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 FMC1Q96HJ9 113 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 ST6GAL2Q96JF0 529 aa6.4□□□□□ -1.38
HCG18-238ENST00000449544 ZZEF1O43149 2961 aa6.4□□□□□ -1.39
HCG18-238ENST00000449544 EXPH5Q8NEV8 1989 aa6.4□□□□□ -1.39
HCG18-238ENST00000449544 FNDC10F2Z333 226 aa6.4□□□□□ -1.39
HCG18-238ENST00000449544 PKIAP61925 76 aa6.4□□□□□ -1.39
HCG18-238ENST00000449544 MRPL54Q6P161 138 aaKnown RBP6.4□□□□□ -1.39
HCG18-238ENST00000449544 KMT2BQ9UMN6 2715 aaPredicted RBP6.4□□□□□ -1.39
HCG18-238ENST00000449544 GGTLC3B5MD39 225 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
HCG18-238ENST00000449544 MEF2BQ02080 365 aaPredicted RBP6.39□□□□□ -1.39
HCG18-238ENST00000449544 NSD1Q96L73 2696 aaPredicted RBP6.39□□□□□ -1.39
HCG18-238ENST00000449544 TRBV20OR9-2A0A075B6H5 130 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 IZUMO1RA6ND01 250 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 RBFOX3A6NFN3 312 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 GYPEP15421 78 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 CFAP161Q6P656 301 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 SH2D6Q7Z4S9 175 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 ZNF114Q8NC26 417 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 NAT8BQ9UHF3 227 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 A0A1W2PRE2 83 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 H3BMM0 161 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 H3BRN7 92 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 RHOHQ15669 191 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 DPPA3Q6W0C5 159 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 Q8N2B8 174 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 UBE2WQ96B02 151 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 PGLYRP4Q96LB8 373 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 GEMIN7Q9H840 131 aaKnown RBP6.39□□□□□ -1.39
HCG18-238ENST00000449544 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 ADARB2-AS1A8MUL3 147 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 RNF152Q8N8N0 203 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 PHYHIPLQ96FC7 376 aa6.39□□□□□ -1.39
HCG18-238ENST00000449544 HMSDA8MTL9 139 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 HLA-DRB4P13762 266 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 C1orf43Q9BWL3 253 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 HLA-DRB4X5D2U9 266 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 A8MWV9 139 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 PPP1R17O96001 155 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 ZNF124Q15973 351 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 AQP10Q96PS8 301 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 G3V3Q6 166 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 AMTP48728 403 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 BOD1L1Q8NFC6 3051 aa6.38□□□□□ -1.39
HCG18-238ENST00000449544 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 A0A087WWL8 130 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 BCL2P10415 239 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 WFDC9Q8NEX5 89 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 CELSR3Q9NYQ7 3312 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 TRAV26-1A0A087WT03 109 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 K7EQG2 157 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 APOHP02749 345 aaPredicted RBP6.37□□□□□ -1.39
HCG18-238ENST00000449544 ANGP03950 147 aaKnown RBP6.37□□□□□ -1.39
HCG18-238ENST00000449544 H2BFSP57053 126 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 DEFB1P60022 68 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 CENPWQ5EE01 88 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 PAPPA-AS1Q5QFB9 102 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 HSBP1L1C9JCN9 74 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 TCRAP04437 139 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 NTF3P20783 257 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 BTN1A1Q13410 526 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 TEX261Q6UWH6 196 aa6.37□□□□□ -1.39
HCG18-238ENST00000449544 LYRM9A8MSI8 78 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 KRTAP21-3Q3LHN1 58 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 MIEN1Q9BRT3 115 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 TRBV9A0A0B4J1U6 114 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 IGHV3-30P01768 117 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 IGHV3-33P01772 117 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 IGHV3-30-3P0DP02 117 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 IGHV3-30-5P0DP03 117 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 CYYR1Q96J86 154 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 TANC2Q9HCD6 1990 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 PRSS1P07477 247 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 SBSPONQ8IVN8 264 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 HHLA3Q9XRX5 114 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.36□□□□□ -1.39
HCG18-238ENST00000449544 A8MWP6 167 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 APCSP02743 223 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 SFTA3P0C7M3 94 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 BTF3P20290 206 aaKnown RBP6.36□□□□□ -1.39
HCG18-238ENST00000449544 RPS10P46783 165 aaKnown RBP6.36□□□□□ -1.39
HCG18-238ENST00000449544 COMMD7Q86VX2 200 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 THAP8Q8NA92 274 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 ARL2-SNX15V9GYD0 113 aa6.36□□□□□ -1.39
HCG18-238ENST00000449544 A0A0J9YX75 114 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 LOC389332A0A1B0GUA5 103 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 M0R2P5 195 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms