RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 ZNF418Q8TF45 676 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-203ENST00000425562 U3KQK5 164 aa10.48□□□□□ -0.73
LRCH3-203ENST00000425562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.48□□□□□ -0.73
LRCH3-203ENST00000425562 A0A1B0GW15 77 aa10.48□□□□□ -0.73
LRCH3-203ENST00000425562 NCBP2LA6PVI3 153 aaKnown RBP10.48□□□□□ -0.73
LRCH3-203ENST00000425562 SIVA1O15304 175 aa10.48□□□□□ -0.73
LRCH3-203ENST00000425562 C12orf74Q32Q52 190 aa10.48□□□□□ -0.73
LRCH3-203ENST00000425562 Q6AWC8 147 aa10.48□□□□□ -0.73
LRCH3-203ENST00000425562 LINC01548A6NM66 108 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 BUB1B-PAK6H3BSN5 160 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 DPM2O94777 84 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 EMP1P54849 157 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 DPF1Q92782 380 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 TNFRSF14Q92956 283 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 TNFRSF13BO14836 293 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-203ENST00000425562 CKS1BP61024 79 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 TMEM30BQ3MIR4 351 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 IL17RELQ6ZVW7 336 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 DTX2Q86UW9 622 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 DYNAPQ8N1N2 210 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 GLMPQ8WWB7 406 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 MRPS12O15235 138 aaKnown RBP10.47□□□□□ -0.73
LRCH3-203ENST00000425562 CRYGBP07316 175 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 TCF15Q12870 199 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 FOXI2Q6ZQN5 318 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
LRCH3-203ENST00000425562 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
LRCH3-203ENST00000425562 ATP6V0BQ99437 205 aa10.46□□□□□ -0.73
LRCH3-203ENST00000425562 ZNF575Q86XF7 245 aa10.46□□□□□ -0.74
LRCH3-203ENST00000425562 CFHR4Q92496 578 aa10.46□□□□□ -0.74
LRCH3-203ENST00000425562 CREBBPQ92793 2442 aa10.46□□□□□ -0.74
LRCH3-203ENST00000425562 SCGB2A2Q13296 93 aa10.45□□□□□ -0.74
LRCH3-203ENST00000425562 FOXC1Q12948 553 aa10.45□□□□□ -0.74
LRCH3-203ENST00000425562 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
LRCH3-203ENST00000425562 E9PLD3 99 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 A0A1B0GV72 72 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 VSTM5A8MXK1 200 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 IGLV1-47P01700 117 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 TTC9CQ8N5M4 171 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 C11orf21Q9P2W6 132 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 DEFB1P60022 68 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 NDPQ00604 133 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 SMAD5-AS1Q9Y6J3 95 aa10.44□□□□□ -0.74
LRCH3-203ENST00000425562 NDUFS8O00217 210 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 APOMO95445 188 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 IGF2-ASQ6U949 168 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 ASCL5Q7RTU5 278 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 MYOZ3Q8TDC0 251 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 IGHG4P01861 327 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 CD3EP07766 207 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 VKORC1Q9BQB6 163 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 SRSF8Q9BRL6 282 aaKnown RBP10.43□□□□□ -0.74
LRCH3-203ENST00000425562 SORL1Q92673 2214 aa10.43□□□□□ -0.74
LRCH3-203ENST00000425562 J3QR89 54 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 HLA-DRB4P13762 266 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 PSMB2P49721 201 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 CDSNQ15517 529 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 ZFP2Q6ZN57 461 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 MRPL16Q9NX20 251 aaKnown RBP10.42□□□□□ -0.74
LRCH3-203ENST00000425562 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 PVRIGQ6DKI7 326 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 KLHL30-AS1Q8NEE0 82 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 HIF1ANQ9NWT6 349 aa10.42□□□□□ -0.74
LRCH3-203ENST00000425562 FANCD2OSQ96PS1 177 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 C21orf62Q9NYP8 219 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 FABP5P3A8MUU1 101 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 F8W1H4 67 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 H3BVH4 76 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 BMI1P35226 326 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 LYPD1Q8N2G4 141 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 KAAG1Q9UBP8 84 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 IGKV3D-20A0A0C4DH25 116 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 M0R381 172 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 CRYBA4P53673 196 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 MFAP4P55083 255 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 SPANXN1Q5VSR9 72 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 SCGB1D4Q6XE38 83 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 TM2D2Q9BX73 214 aa10.41□□□□□ -0.74
LRCH3-203ENST00000425562 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
LRCH3-203ENST00000425562 IGKV3-7A0A075B6H7 116 aa10.4□□□□□ -0.74
LRCH3-203ENST00000425562 LINC01549A6NIU2 74 aa10.4□□□□□ -0.74
LRCH3-203ENST00000425562 F8W735 103 aaPredicted RBP10.4□□□□□ -0.74
LRCH3-203ENST00000425562 IGF1P05019 195 aa10.4□□□□□ -0.74
LRCH3-203ENST00000425562 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.74
LRCH3-203ENST00000425562 NBR2O15453 112 aa10.4□□□□□ -0.75
LRCH3-203ENST00000425562 GATA3P23771 443 aa10.4□□□□□ -0.75
LRCH3-203ENST00000425562 RRN3P1Q2M238 152 aa10.4□□□□□ -0.75
LRCH3-203ENST00000425562 ZNF672Q499Z4 452 aaPredicted RBP10.4□□□□□ -0.75
LRCH3-203ENST00000425562 ZMAT4Q9H898 229 aa10.4□□□□□ -0.75
LRCH3-203ENST00000425562 TRBV6-1A0A0K0K1D8 114 aa10.39□□□□□ -0.75
LRCH3-203ENST00000425562 SRSF9Q13242 221 aaKnown RBP eCLIP10.39□□□□□ -0.75
LRCH3-203ENST00000425562 ANXA2RQ3ZCQ2 193 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms