RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 THEM6Q8WUY1 208 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 NAT14Q8WUY8 206 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 PRELID3AQ96N28 172 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 EFCAB11Q9BUY7 163 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 PCBD2Q9H0N5 130 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 TCEAL2Q9H3H9 227 aaPredicted RBP-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 ASH1LQ9NR48 2969 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 TRAPPC2LQ9UL33 140 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 MED31Q9Y3C7 131 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 DSTQ03001 7570 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 CTTNBP2Q8WZ74 1663 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 IGF2RP11717 2491 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FANCMQ8IYD8 2048 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 FAM208BQ5VWN6 2430 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 NF1P21359 2839 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 MYH7BA7E2Y1 1941 aa-0.03□□□□□ -2.41
TRAPPC13-203ENST00000415825 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.42
TRAPPC13-203ENST00000415825 KIF1BO60333 1816 aa-0.03□□□□□ -2.42
TRAPPC13-203ENST00000415825 NUP98P52948 1817 aa-0.03□□□□□ -2.42
TRAPPC13-203ENST00000415825 CACNA1AO00555 2505 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 FGD6Q6ZV73 1430 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TRAPPC8Q9Y2L5 1435 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TENM2Q9NT68 2774 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 SRRM2Q9UQ35 2752 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TEP1Q99973 2627 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 POLQO75417 2590 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 SETD2Q9BYW2 2564 aaPredicted RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 A0A096LNT2 108 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TRAV13-1A0A0B4J241 112 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TRBV7-6A0A0J9YX20 115 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 A0A1B0GW64 132 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 SLC25A5P05141 298 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 GYPBP06028 91 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 CRYGSP22914 178 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 SDC2P34741 201 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 CAV3P56539 151 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TCTAP57738 103 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 MAXP61244 160 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 RPL37P61927 97 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TRIQKQ629K1 86 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 XAF1Q6GPH4 301 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 C10orf99Q6UWK7 81 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 LYPD5Q6UWN5 251 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 LINC00299Q6ZSB3 139 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 C10orf111Q8N326 155 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 TCTEX1D1Q8N7M0 179 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR51A4Q8NGJ6 313 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 GRPEL2Q8TAA5 225 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 CCDC115Q96NT0 180 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 CIB3Q96Q77 187 aaPredicted RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPRR2GQ9BYE4 73 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 MRPL36Q9P0J6 103 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 HSPB8Q9UJY1 196 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 BOKQ9UMX3 212 aaPredicted RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 MPC1Q9Y5U8 109 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 LRP1Q07954 4544 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 COL6A3P12111 3177 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 KIAA1107Q9UPP5 1409 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 DOPEY2Q9Y3R5 2298 aa-0.04□□□□□ -2.42
TRAPPC13-203ENST00000415825 MAP1AP78559 2803 aaPredicted RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SPAG17Q6Q759 2223 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 MUC12Q9UKN1 5478 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 NBEAL1Q6ZS30 2694 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 CHD9Q3L8U1 2897 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 USP9XQ93008 2570 aaPredicted RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 CXorf51AA0A1B0GTR3 108 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 A0A1W2PPB8 328 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TMEM189A5PLL7 270 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 PRORSD1PA6NEY8 169 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 KIR3DP1A8MWS1 328 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 E5RI56 91 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 PGRMC1O00264 195 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SULT1C4O75897 302 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 IGF2P01344 180 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 HBDP02042 147 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 MT-ND4LP03901 98 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 CD3DP04234 171 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TCRAP04437 139 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 NBEAP1P0C6P0 100 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SAA1P0DJI8 122 aaPredicted RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TPT1P13693 172 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SDC4P31431 198 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 S100A5P33763 92 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 RPL22P35268 128 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 NDUFA6P56556 154 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 SNRPD3P62318 126 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TMEM128Q5BJH2 165 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 Q6ZS92 163 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 IFT20Q8IY31 132 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR4B1Q8NGF8 309 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR5A2Q8NGI9 324 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 OR5AK2Q8NH90 309 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 OTOSQ8NHW6 89 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 TSKUQ8WUA8 353 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 BRK1Q8WUW1 75 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 ISOC1Q96CN7 298 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 CCDC32Q9BV29 185 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 MRPL35Q9NZE8 188 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 LAMTOR3Q9UHA4 124 aa-0.05□□□□□ -2.42
TRAPPC13-203ENST00000415825 JPT1Q9UK76 154 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms