RNA–Protein interactions for RNA: ENST00000414723.1

GCA-202, Transcript of grancalcin, humanhuman

TSL 3

Gene GCA, Length 655 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-202ENST00000414723 GABARAPH6UMI1 98 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 H7BYZ3 331 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 J3KT08 172 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 RER1O15258 196 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 OR1I1O60431 355 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 LYZL6O75951 148 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 DHFRP00374 187 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 DBIP07108 87 aaKnown RBP0.83□□□□□ -2.28
GCA-202ENST00000414723 CXCL1P09341 107 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 FABP2P12104 132 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 RPL7P18124 248 aaKnown RBP0.83□□□□□ -2.28
GCA-202ENST00000414723 SDC2P34741 201 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 SSR2P43308 183 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 SRP9P49458 86 aaKnown RBP0.83□□□□□ -2.28
GCA-202ENST00000414723 RAB5CP51148 216 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 KLRD1Q13241 179 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 SMCO1Q147U7 214 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 MSMO1Q15800 293 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 CCDC153Q494R4 210 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 RNASE10Q5GAN6 216 aaKnown RBP0.83□□□□□ -2.28
GCA-202ENST00000414723 PATE2Q6UY27 113 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 Q8N2B8 174 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 TMEM229BQ8NBD8 167 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 OR2T35Q8NGX2 323 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 OR4C6Q8NH72 309 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 ZNF418Q8TF45 676 aaPredicted RBP0.83□□□□□ -2.28
GCA-202ENST00000414723 SFT2D1Q8WV19 159 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 C4orf3Q8WVX3 66 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 MAFIPQ8WZ33 124 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 COL4A5P29400 1685 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 LMO7Q8WWI1 1683 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 AKAP11Q9UKA4 1901 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 MON2Q7Z3U7 1717 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 UBR1Q8IWV7 1749 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 TOGARAM1Q9Y4F4 1720 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 RFX7Q2KHR2 1363 aa0.83□□□□□ -2.28
GCA-202ENST00000414723 NUP98P52948 1817 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 LAMA4Q16363 1823 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 KIF20BQ96Q89 1820 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 LRP6O75581 1613 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 CICQ96RK0 1608 aaPredicted RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 NUP210LQ5VU65 1888 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 C4AP0C0L4 1744 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 C4BP0C0L5 1744 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 TRAV36DV7A0A075B6V5 113 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 TRAV3A0A0B4J244 114 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 TRAV12-1A0A0B4J245 112 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 ODAMA1E959 279 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 LYRM1O43325 122 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 HCRTO43612 131 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 RPS3P23396 243 aaKnown RBP eCLIP0.82□□□□□ -2.28
GCA-202ENST00000414723 ROMO1P60602 79 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 MRPS36P82909 103 aaKnown RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 PDE6HQ13956 83 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 HRCT1Q6UXD1 115 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 LINC00305Q7Z4B0 112 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 Q8IYB0 196 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 C15orf53Q8NAA6 179 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 OR4B1Q8NGF8 309 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 TMEM254Q8TBM7 123 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 LZICQ8WZA0 190 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 CHCHD1Q96BP2 118 aaKnown RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 TRAPPC2LQ9UL33 140 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 SCN8AQ9UQD0 1980 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 SIPA1L3O60292 1781 aaPredicted RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 KDM3BQ7LBC6 1761 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 COL6A6A6NMZ7 2263 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 XIRP1Q702N8 1843 aaKnown RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 KIF13AQ9H1H9 1805 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 RTL9Q8NET4 1388 aa0.82□□□□□ -2.28
GCA-202ENST00000414723 NUP210Q8TEM1 1887 aaPredicted RBP0.82□□□□□ -2.28
GCA-202ENST00000414723 KIF1AQ12756 1690 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 ALS2Q96Q42 1657 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 OVOS2A0A0G2JMS6 1433 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 ANKARQ7Z5J8 1434 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 MYH10P35580 1976 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 NUP188Q5SRE5 1749 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 FMN2Q9NZ56 1722 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 ANKRD26Q9UPS8 1709 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 SCN11AQ9UI33 1791 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 AFDNP55196 1824 aaKnown RBP0.81□□□□□ -2.28
GCA-202ENST00000414723 A0A087WSZ3 146 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 TRAV27A0A087WT01 109 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 TRAV13-1A0A0B4J241 112 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 TRBV27A0A0K0K1C4 114 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 TCRBV4S1A1TA0A5B7 111 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 TMEM189A5PLL7 270 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 C2orf70A6NJV1 201 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 E7EUB6 86 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 H3BMG7 143 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 K7ERJ3 54 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 M0QZK8 103 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 M0R233 179 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 ARPC5O15511 151 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 HYPMO75409 117 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 DPM2O94777 84 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 HMGN1P05114 100 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 SCTP09683 121 aa0.81□□□□□ -2.28
GCA-202ENST00000414723 RNASE3P12724 160 aaKnown RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms