RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 TRBV24-1A0A075B6N3 115 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGKV1D-37A0A075B6S9 117 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A0A0B4J2C4 111 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRBV27A0A0K0K1C4 114 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A0A1W2PPM0 123 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 A6NED7 52 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 APOC4-APOC2K7ER74 178 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 LECT2O14960 151 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 NUPR1O60356 82 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 CREBL2O60519 120 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 SNCGO76070 127 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 APOC2P02655 101 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 IGFBP7Q16270 282 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 MIC13Q5XKP0 118 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 LYZL2Q7Z4W2 148 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 ZFAND2AQ8N6M9 145 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR10P1Q8NGE3 313 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 TOMM6Q96B49 74 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 ABHD14BQ96IU4 210 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 CKLFQ9UBR5 152 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 V9GYH0 126 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 PIK3C2BO00750 1634 aa2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 URB2Q14146 1524 aaKnown RBP2.67□□□□□ -1.98
HMGB1P13-201ENST00000406019 MYH7BA7E2Y1 1941 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CDC42BPAQ5VT25 1732 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 TRGV5A0A0B4J1U4 118 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 IRGMA1A4Y4 181 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 UBE2L6O14933 153 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 SH2D1AO60880 128 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CST7O76096 145 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 COX7CP15954 63 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 LGALS3P17931 250 aaKnown RBP2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 HLA-DMBP28068 263 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 FGF12P61328 243 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 SEC11AP67812 179 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 HBBP68871 147 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 BSPH1Q075Z2 132 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ELOBQ15370 118 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADIRFQ15847 76 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ETDBQ3ZM63 59 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 PRR9Q5T870 116 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 PP632Q6XCG6 107 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 MORN4Q8NDC4 146 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 C1orf64Q8NEQ6 169 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 OR2T35Q8NGX2 323 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 AQP10Q96PS8 301 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 TNRC6AQ8NDV7 1962 aaKnown RBP2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ANKRD31Q8N7Z5 1873 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 EFCAB5A4FU69 1503 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 ADGRB3O60242 1522 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 CITO14578 2027 aa2.66□□□□□ -1.98
HMGB1P13-201ENST00000406019 COL1A1P02452 1464 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P13-201ENST00000406019 SYCP2Q9BX26 1530 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 HMSDA8MTL9 139 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 H3BUT2 72 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 GYPBP06028 91 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 RNASE4P34096 147 aaKnown RBP2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 DPPA3Q6W0C5 159 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 PHF5AQ7RTV0 110 aaKnown RBP2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 CLDND2Q8NHS1 167 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 FAM213BQ8TBF2 198 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 IMMP2LQ96T52 175 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 PMCHL2Q9BQD1 86 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC35B3Q9H1N7 401 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SLC39A9Q9NUM3 307 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 EPDR1Q9UM22 224 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 R4GN34 69 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 CACNA1DQ01668 2161 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 SHANK1Q9Y566 2161 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 ANKARQ7Z5J8 1434 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 DOCK4Q8N1I0 1966 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 NWD2Q9ULI1 1742 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 C1orf167Q5SNV9 1468 aa2.65□□□□□ -1.99
HMGB1P13-201ENST00000406019 HMGXB3Q12766 1538 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 A0A087WWC5 75 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 TRBV7-7A0A0K0K1E9 115 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 hADV29S1A0JD25 119 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 PROSCO94903 275 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 IGKV1-16P04430 117 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ASIPP42127 132 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 DYNLT3P51808 116 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 NPC2P61916 151 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 C2orf50Q96LR7 162 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 SPANXDQ9BXN6 97 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 DPH3P1Q9H4G8 78 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 TXNL4BQ9NX01 149 aaKnown RBP2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ANK1P16157 1881 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 ADGRL1O94910 1474 aa2.64□□□□□ -1.99
HMGB1P13-201ENST00000406019 CDK13Q14004 1512 aaKnown RBP2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 TIAM1Q13009 1591 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 A0A1B0GU33 70 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 SYS1-DBNDD2H3BUS1 97 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NDUFB3O43676 98 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 ZNF737O75373 536 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 NDUFB2O95178 105 aa2.63□□□□□ -1.99
HMGB1P13-201ENST00000406019 HBDP02042 147 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms