RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 BLCAPP62952 87 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 PRSS57Q6UWY2 283 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 FAM223AQ8IWN6 122 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 MUC4Q99102 2169 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 GATA1P15976 413 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-202ENST00000394888 ZNF25P17030 456 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-202ENST00000394888 PRELID3AQ96N28 172 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 ST20Q9HBF5 79 aa11.68□□□□□ -0.54
CPSF7-202ENST00000394888 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
CPSF7-202ENST00000394888 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.546e-8■■■■□ 22.6
CPSF7-202ENST00000394888 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPSF7-202ENST00000394888 LCNL1Q6ZST4 164 aa11.67□□□□□ -0.54
CPSF7-202ENST00000394888 CYB5R2Q6BCY4 276 aa11.67□□□□□ -0.54
CPSF7-202ENST00000394888 ORMDL3Q8N138 153 aa11.67□□□□□ -0.54
CPSF7-202ENST00000394888 FABP5P3A8MUU1 101 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 RNF223E7ERA6 249 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 GOSR1O95249 250 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 ATP5G2Q06055 141 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 ZFAND2AQ8N6M9 145 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 NRACQ8N912 160 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 CCL19Q99731 98 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 IGHV4-4A0A075B6R2 117 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 HNRNPA3P51991 378 aaKnown RBP11.66□□□□□ -0.54
CPSF7-202ENST00000394888 RAB9AP51151 201 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
CPSF7-202ENST00000394888 SNAI2O43623 268 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 BMI1P35226 326 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 KLHDC1Q8N7A1 406 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 TWIST1Q15672 202 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 APRG1Q8IVJ8 170 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 PIMREGQ9BSJ6 248 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
CPSF7-202ENST00000394888 BATFQ16520 125 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 DEFB125Q8N687 156 aa11.65□□□□□ -0.54
CPSF7-202ENST00000394888 HINT1P49773 126 aaPredicted RBP11.64□□□□□ -0.55
CPSF7-202ENST00000394888 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 ANKRD39Q53RE8 183 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 COL5A1-AS1Q5SY13 56 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 PRSS47A8MTI9 375 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 H3BUX3 64 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 TENM4Q6N022 2769 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 ANK3Q12955 4377 aaKnown RBP11.64□□□□□ -0.55
CPSF7-202ENST00000394888 METTL26Q96S19 204 aa11.64□□□□□ -0.55
CPSF7-202ENST00000394888 NDUFS8O00217 210 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 ZNF124Q15973 351 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 TEX15Q9BXT5 2789 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 LY6EQ16553 131 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 ARL3P36405 182 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
CPSF7-202ENST00000394888 NDUFA4O00483 81 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 ORM1P02763 201 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 MSMBP08118 114 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 HIST1H1AQ02539 215 aaPredicted RBP11.62□□□□□ -0.55
CPSF7-202ENST00000394888 C10orf99Q6UWK7 81 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 APCP25054 2843 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 EVI2AP22794 236 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 PRSS3P2Q8NHM4 247 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 HIF1ANQ9NWT6 349 aa11.62□□□□□ -0.55
CPSF7-202ENST00000394888 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
CPSF7-202ENST00000394888 TMEM95Q3KNT9 176 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 MPV17L2Q567V2 206 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 BVES-AS1Q5T3Y7 98 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 H3BUA1 57 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 TNFRSF6BO95407 300 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 LGALS9BQ3B8N2 356 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 LGALS9CQ6DKI2 356 aa11.61□□□□□ -0.55
CPSF7-202ENST00000394888 SPRY2O43597 315 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 TCF21O43680 179 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 SCGB2A1O75556 95 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 COX8AP10176 69 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 BBC3Q96PG8 261 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-202ENST00000394888 TRAV26-2A0A0B4J265 109 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 FA2HQ7L5A8 372 aa11.6□□□□□ -0.55
CPSF7-202ENST00000394888 CKS2P33552 79 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 MS4A6AQ9H2W1 248 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 ZNF580Q9UK33 172 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 HHLA3Q9XRX5 114 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 H0Y8G0 127 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 IGHV3-11P01762 117 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 SELENOKQ9Y6D0 94 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 F6UB75 175 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 TAX1BP3O14907 124 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 HBDP02042 147 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 PSMB8P28062 276 aa11.59□□□□□ -0.55
CPSF7-202ENST00000394888 CCL25O15444 150 aa11.58□□□□□ -0.55
CPSF7-202ENST00000394888 FSHBP01225 129 aa11.58□□□□□ -0.55
CPSF7-202ENST00000394888 DPF1Q92782 380 aa11.58□□□□□ -0.55
CPSF7-202ENST00000394888 DKK2Q9UBU2 259 aa11.58□□□□□ -0.55
CPSF7-202ENST00000394888 COX11Q9Y6N1 276 aa11.58□□□□□ -0.55
CPSF7-202ENST00000394888 ATP5J2P56134 94 aa11.58□□□□□ -0.56
CPSF7-202ENST00000394888 TM4SF20Q53R12 229 aa11.58□□□□□ -0.56
CPSF7-202ENST00000394888 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
CPSF7-202ENST00000394888 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
CPSF7-202ENST00000394888 OR4X2Q8NGF9 303 aa11.57□□□□□ -0.56
CPSF7-202ENST00000394888 CACNG7P62955 275 aa11.57□□□□□ -0.56
CPSF7-202ENST00000394888 ORAOV1Q8WV07 137 aa11.57□□□□□ -0.56
CPSF7-202ENST00000394888 LENEPQ9Y5L5 61 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms