RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 SZT2Q5T011 3432 aa4.52□□□□□ -1.69
RFFL-202ENST00000394597 TLN1Q9Y490 2541 aaKnown RBP4.52□□□□□ -1.69
RFFL-202ENST00000394597 TRGV3P03979 118 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 HTN1P15515 57 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 CT83Q5H943 113 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 TEN1Q86WV5 123 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 TMEM158Q8WZ71 300 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 RAX2Q96IS3 184 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 METTL26Q96S19 204 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 CEP295Q9C0D2 2601 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 MRPL23Q16540 153 aaKnown RBP4.51□□□□□ -1.69
RFFL-202ENST00000394597 TAL2Q16559 108 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 LINC01559Q495D7 138 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 ZNF295-AS1Q8N0V1 137 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 GTSF1Q8WW33 167 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 PTH2Q96A98 100 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 OTORQ9NRC9 128 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 MSMBP08118 114 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 GATA3P23771 443 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 PLNP26678 52 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 FAM159AQ6UWV7 190 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 C2orf82Q6UX34 121 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 S4R3C0 116 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 FABP5P3A8MUU1 101 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 RNASE2P10153 161 aaKnown RBP4.51□□□□□ -1.69
RFFL-202ENST00000394597 SAA4P35542 130 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 POU2AF1Q16633 256 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 BRD3OSQ6XYD6 125 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 C2orf91Q6ZV80 131 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 EXOC3-AS1Q8N2X6 119 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 MOB4Q9Y3A3 225 aa4.51□□□□□ -1.69
RFFL-202ENST00000394597 TNCP24821 2201 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 SLC25A20O43772 301 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 LTAP01374 205 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3-23P01764 117 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 FAM106AQ4KMX7 169 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 Q6ZPA2 131 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 OR11H6Q8NGC7 330 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 TMEM126AQ9H061 195 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 NDUFA4L2Q9NRX3 87 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 PMS2P5A8MQ11 134 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 HAX1O00165 279 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 CRXO43186 299 aaPredicted RBP4.5□□□□□ -1.69
RFFL-202ENST00000394597 ID1P41134 155 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 INSL3P51460 131 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 DLX6P56179 175 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 NDUFV3P56181 108 aaKnown RBP4.5□□□□□ -1.69
RFFL-202ENST00000394597 DIAPH2-AS1Q14236 149 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 TMEM78Q5T7P6 136 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 NTN5Q8WTR8 489 aaPredicted RBP4.5□□□□□ -1.69
RFFL-202ENST00000394597 SPXQ9BT56 116 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 IGHV3-35A0A0C4DH35 117 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 TMEM213A2RRL7 107 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 SRRM4A7MD48 611 aaKnown RBP4.5□□□□□ -1.69
RFFL-202ENST00000394597 ASIPP42127 132 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 PMVKQ15126 192 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 C5orf47Q569G3 176 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 GAGE2AQ6NT46 116 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 ZNF492Q9P255 531 aa4.5□□□□□ -1.69
RFFL-202ENST00000394597 IGHV1-69DA0A0B4J2H0 117 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 MYMXA0A1B0GTQ4 84 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 IGHV1-69P01742 117 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 CGB3P0DN86 165 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 CGB7P0DN87 165 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 SRSF1Q07955 248 aaKnown RBP eCLIP4.49□□□□□ -1.69
RFFL-202ENST00000394597 PVRIGQ6DKI7 326 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 ASCL2Q99929 193 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 MRPL35Q9NZE8 188 aaKnown RBP4.49□□□□□ -1.69
RFFL-202ENST00000394597 A0A1W2PPI3 338 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 RNF223E7ERA6 249 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 H3BMM0 161 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 H7C1H1 209 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 CNTFRP26992 372 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRR20EP86478 221 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRR20CP86479 221 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRR20DP86480 221 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRR20BP86481 221 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRR20AP86496 221 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 ATXN8Q156A1 80 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 GDF5OSQ5U4N7 250 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 FAM104BQ5XKR9 115 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 CLEC19AQ6UXS0 136 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 TMEM219Q86XT9 240 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 UBE2WQ96B02 151 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 PRSS22Q9GZN4 317 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 HIGD1BQ9P298 99 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 H3BUX3 64 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 C19orf84I3L1E1 186 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 LAGE3Q14657 143 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 Q86TA4 180 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 ATP6V0E2Q8NHE4 81 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 SPTBN4Q9H254 2564 aa4.49□□□□□ -1.69
RFFL-202ENST00000394597 ANKRD11Q6UB99 2663 aaPredicted RBP4.49□□□□□ -1.69
RFFL-202ENST00000394597 TANC2Q9HCD6 1990 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 TRAV41A0A0B4J266 112 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 TRAV12-3A0A0B4J271 114 aa4.48□□□□□ -1.69
RFFL-202ENST00000394597 E9PLD3 99 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms