RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 KIR2DL4Q99706 377 aa14.88□□□□□ -0.03
CCDC50-202ENST00000392456 NHP2Q9NX24 153 aaKnown RBP14.88□□□□□ -0.03
CCDC50-202ENST00000392456 TLN2Q9Y4G6 2542 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 PDZD2O15018 2839 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 TMEM167AQ8TBQ9 72 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 A8MWL6 223 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 MPDU1O75352 247 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 UBE2E1P51965 193 aa14.87□□□□□ -0.03
CCDC50-202ENST00000392456 SMCPP49901 116 aaPredicted RBP14.86□□□□□ -0.03
CCDC50-202ENST00000392456 HIGD1BQ9P298 99 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 ITPR3Q14573 2671 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 TCRBV4S1A1TA0A5B7 111 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 CRYGBP07316 175 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 SAA4P35542 130 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 PRCDQ00LT1 54 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 DEFB113Q30KQ7 82 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 TMEM126AQ9H061 195 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 FBXL15Q9H469 300 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 ZNF355PQ9NSJ1 428 aa14.86□□□□□ -0.03
CCDC50-202ENST00000392456 TCTAP57738 103 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 RUSC1-AS1Q66K80 236 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 TREML4Q6UXN2 200 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 TMUB1Q9BVT8 246 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 ZNF138P52744 262 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 DSCR9P59020 149 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 TMEM78Q5T7P6 136 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 ASPHD1Q5U4P2 390 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 FAM159AQ6UWV7 190 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 NDUFA4L2Q9NRX3 87 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 SIGLEC9Q9Y336 463 aa14.85□□□□□ -0.03
CCDC50-202ENST00000392456 SOX21Q9Y651 276 aaPredicted RBP14.85□□□□□ -0.03
CCDC50-202ENST00000392456 MSMBP08118 114 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 VMA21Q3ZAQ7 101 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 CFAP126Q5VTH2 177 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 FAM231DQ6ZW35 169 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 AVPP01185 164 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 APELAP0DMC3 54 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 ATP5IP56385 69 aaPredicted RBP14.84□□□□□ -0.03
CCDC50-202ENST00000392456 MIC13Q5XKP0 118 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 CARD19Q96LW7 228 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 MGST2Q99735 147 aa14.84□□□□□ -0.03
CCDC50-202ENST00000392456 RNF223E7ERA6 249 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 IFITM1P13164 125 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 BRD3OSQ6XYD6 125 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 TPPP3Q9BW30 176 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 PLEKHA3Q9HB20 300 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 TIMM8BQ9Y5J9 83 aaPredicted RBP14.83□□□□□ -0.04
CCDC50-202ENST00000392456 NOTCH2Q04721 2471 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 HIGD1CA8MV81 97 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 WT1-ASQ06250 92 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 HES1Q14469 280 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 LGALS9BQ3B8N2 356 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 MEIG1Q5JSS6 88 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 MINOS1Q5TGZ0 78 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 LGALS9CQ6DKI2 356 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 SLC25A33Q9BSK2 321 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 MINOS1-NBL1R4GNA1 71 aa14.83□□□□□ -0.04
CCDC50-202ENST00000392456 PRSS46E5RG02 174 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 CHEK1O14757 476 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 IGHV4-38-2P0DP08 117 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 SLC25A16P16260 332 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 NMUP48645 174 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 GAGE2BQ13066 116 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 GAGE2EQ4V326 116 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 PPDPFLQ8WWR9 84 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 DNAJC30Q96LL9 226 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 GAGE2DQ9UEU5 116 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 HBBP68871 147 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 PPP1R27Q86WC6 154 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 OR1L8Q8NGR8 309 aa14.82□□□□□ -0.04
CCDC50-202ENST00000392456 MXRA5Q9NR99 2828 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 TRAV40A0A0B4J280 105 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 NPFFO15130 113 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 KRTAP1-3Q8IUG1 177 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 CHAC1Q9BUX1 264 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 C7orf69Q9H7B7 122 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 ENY2Q9NPA8 101 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 B4DSR2 109 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 NPIPB6E9PJ23 425 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 MOSP00540 346 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 MLANAQ16655 118 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 TTC32Q5I0X7 151 aa14.81□□□□□ -0.04
CCDC50-202ENST00000392456 BEX4Q9NWD9 120 aaPredicted RBP14.81□□□□□ -0.04
CCDC50-202ENST00000392456 CSN1S1P47710 185 aa14.8□□□□□ -0.04
CCDC50-202ENST00000392456 CEND1Q8N111 149 aa14.8□□□□□ -0.04
CCDC50-202ENST00000392456 FLNAP21333 2647 aaKnown RBP14.8□□□□□ -0.04
CCDC50-202ENST00000392456 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
CCDC50-202ENST00000392456 RNASE2P10153 161 aaKnown RBP14.78□□□□□ -0.04
CCDC50-202ENST00000392456 C1orf159Q96HA4 380 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 AKAP9Q99996 3911 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 ACANP16112 2415 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 PLGLAQ15195 96 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 C12orf74Q32Q52 190 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 SSMEM1Q8WWF3 244 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 RNF5Q99942 180 aa14.78□□□□□ -0.04
CCDC50-202ENST00000392456 LSM4Q9Y4Z0 139 aaKnown RBP14.78□□□□□ -0.04
CCDC50-202ENST00000392456 IGHV1-69DA0A0B4J2H0 117 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 TMEM262E9PQX1 116 aa14.77□□□□□ -0.04
CCDC50-202ENST00000392456 NBR2O15453 112 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms