RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 PFN2P35080 140 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 CT83Q5H943 113 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 IFITM1P13164 125 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 AZU1P20160 251 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 PPDPFLQ8WWR9 84 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 SIGLEC8Q9NYZ4 499 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 KMT2EQ8IZD2 1858 aa9.58□□□□□ -0.88
PCDHA9-201ENST00000378122 PDE6HQ13956 83 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 VWC2Q2TAL6 325 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 LY6G5BQ8NDX9 201 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 TMEM141Q96I45 108 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 TRBV19A0A075B6N1 114 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 ATP6V0E1O15342 81 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 NDUFB8O95169 186 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 Q6ZQT7 251 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 PRIMA1Q86XR5 153 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 SRSF8Q9BRL6 282 aaKnown RBP9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 LGALS9BQ3B8N2 356 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 FAM120AOSQ5T036 256 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 LGALS9CQ6DKI2 356 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 Q6ZVH6 145 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 DOCK11Q5JSL3 2073 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 NDUFS7O75251 213 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 CITED1Q99966 193 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 K7EM74 188 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 GATA3P23771 443 aa9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 SRSF2Q01130 221 aaKnown RBP9.57□□□□□ -0.88
PCDHA9-201ENST00000378122 INAFM1C9JVW0 142 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 NEGR1Q7Z3B1 354 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 TPSG1Q9NRR2 321 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 OVOL3O00110 214 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 GAGE6Q13070 117 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 IGHG3P01860 377 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 PCNX2A6NKB5 2137 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 IGHV1-69DA0A0B4J2H0 117 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 IGHV1-69P01742 117 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 HIST2H2BDQ6DRA6 164 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 C2orf66Q6UXQ4 117 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 ETDBQ3ZM63 59 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 Q6ZR03 302 aa9.56□□□□□ -0.88
PCDHA9-201ENST00000378122 TRBV20-1A0A075B6N2 111 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 DNAJC30Q96LL9 226 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 H3BMG7 143 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 H3BRN7 92 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 PMVKQ15126 192 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 PROK2Q9HC23 129 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 NKAPP1Q8N9T2 125 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 MORN5Q5VZ52 161 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 FGF6P10767 208 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
PCDHA9-201ENST00000378122 MMP23AO75900 390 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 TEX36Q5VZQ5 186 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 OR11H6Q8NGC7 330 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 RNASE13Q5GAN3 156 aaKnown RBP9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 ATRXP46100 2492 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 I3L3M4 83 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 NPYP01303 97 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 SS18Q15532 418 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 DKK2Q9UBU2 259 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 KLK5Q9Y337 293 aaPredicted RBP9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 DTX1Q86Y01 620 aa9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
PCDHA9-201ENST00000378122 DIAPH2-AS1Q14236 149 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 PLA2G2CQ5R387 149 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 FXYD5Q96DB9 178 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 ZNF134P52741 427 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 C8orf86Q6ZUL3 223 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 C15orf65H3BRN8 121 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 DEFB112Q30KQ8 113 aa9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
PCDHA9-201ENST00000378122 SOCS3O14543 225 aa9.52□□□□□ -0.88
PCDHA9-201ENST00000378122 LYPD6BQ8NI32 183 aa9.52□□□□□ -0.88
PCDHA9-201ENST00000378122 G3V318 75 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV4-59P01825 116 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 C15orf53Q8NAA6 179 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 IGLL5B9A064 214 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 HLA-DRB4P13762 266 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 IGHV4-30-2A0A087WSY4 118 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 CCL25O15444 150 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 CDKN1BP46527 198 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 Q8TCH9 128 aa9.52□□□□□ -0.89
PCDHA9-201ENST00000378122 ANGP03950 147 aaKnown RBP9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 RSPO1Q2MKA7 263 aaPredicted RBP9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 PRR25Q96S07 402 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 CCL24O00175 119 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 SIVA1O15304 175 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 TRACP01848 142 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 WT1-ASQ06250 92 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 KLF5Q13887 457 aaPredicted RBP9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 C12orf74Q32Q52 190 aa9.51□□□□□ -0.89
PCDHA9-201ENST00000378122 Q8NFD4 153 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms