RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 CFAP161Q6P656 301 aa6.71□□□□□ -1.33
VPS36-201ENST00000378060 FAM110DQ8TAY7 271 aaPredicted RBP6.71□□□□□ -1.33
VPS36-201ENST00000378060 PRR25Q96S07 402 aa6.71□□□□□ -1.33
VPS36-201ENST00000378060 ZGRF1Q86YA3 2104 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 COL8A2P25067 703 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 CPAMD8Q8IZJ3 1885 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 FXYD5Q96DB9 178 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 NCKAP5O14513 1909 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 LOXP28300 417 aaPredicted RBP6.71□□□□□ -1.34
VPS36-201ENST00000378060 CEACAM8P31997 349 aaPredicted RBP6.71□□□□□ -1.34
VPS36-201ENST00000378060 IGFL3Q6UXB1 125 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 ADAMTSL5Q6ZMM2 481 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 PLA2G2EQ9NZK7 142 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 ZNRD1Q9P1U0 126 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 PLCE1Q9P212 2302 aa6.71□□□□□ -1.34
VPS36-201ENST00000378060 TRBV20-1A0A075B6N2 111 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 KRTAP27-1Q3LI81 207 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 IGF2-ASQ6U949 168 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 TMEM86BQ8N661 226 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 SPANXA1Q9NS26 97 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 SIVA1O15304 175 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 ZNF688P0C7X2 276 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 KLF5Q13887 457 aaPredicted RBP6.7□□□□□ -1.34
VPS36-201ENST00000378060 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
VPS36-201ENST00000378060 C8orf31Q8N9H6 132 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 GTSF1LQ9H1H1 148 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 H3BRN7 92 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 IGLC1P0CG04 106 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
VPS36-201ENST00000378060 ZNF415Q09FC8 603 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 TMEM219Q86XT9 240 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
VPS36-201ENST00000378060 RHPN1-AS1Q9BWJ2 59 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 PRB4P10163 310 aaPredicted RBP6.7□□□□□ -1.34
VPS36-201ENST00000378060 IGFL4Q6B9Z1 124 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 LY6G5BQ8NDX9 201 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 RASL10AQ92737 203 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 RCHY1Q96PM5 261 aa6.7□□□□□ -1.34
VPS36-201ENST00000378060 ADARB2-AS1A8MUL3 147 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 H3BUX3 64 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 K7EN84 100 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 SRD5A1P18405 259 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 NDPQ00604 133 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 TAL2Q16559 108 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 DAZ1Q9NQZ3 744 aaKnown RBP6.69□□□□□ -1.34
VPS36-201ENST00000378060 TRAV12-3A0A0B4J271 114 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 IGKV3D-20A0A0C4DH25 116 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 B4DSR2 109 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 UBE2E1P51965 193 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 TRGV4A0A0C4DH28 118 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 SLC25A20O43772 301 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 FCN3O75636 299 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 CKS1BP61024 79 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 UNQ6494/PRO21346Q6UXR6 183 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 SIGLEC8Q9NYZ4 499 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 ADGRG4Q8IZF6 3080 aa6.69□□□□□ -1.34
VPS36-201ENST00000378060 K7EP13 123 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 SSBP2P81877 361 aaPredicted RBP6.68□□□□□ -1.34
VPS36-201ENST00000378060 ERCC8Q13216 396 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 Q5PR19 223 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 IGHV3-64A0A075B6Q5 118 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 F8W1H4 67 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 LTAP01374 205 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 SAA4P35542 130 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 BVES-AS1Q5T3Y7 98 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 C11orf53Q8IXP5 236 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 SELENOKQ9Y6D0 94 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 CHD3Q12873 2000 aaKnown RBP6.68□□□□□ -1.34
VPS36-201ENST00000378060 PRSS57Q6UWY2 283 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 TRPT1Q86TN4 253 aaKnown RBP6.68□□□□□ -1.34
VPS36-201ENST00000378060 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 K7EP34 96 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 WISP2O76076 250 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
VPS36-201ENST00000378060 F8VRH5 84 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 ZC2HC1AQ96GY0 325 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 CHCHD5Q9BSY4 110 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 ZNF747Q9BV97 191 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 FGF23Q9GZV9 251 aaPredicted RBP6.67□□□□□ -1.34
VPS36-201ENST00000378060 FREM1Q5H8C1 2179 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 SPG11Q96JI7 2443 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 RHODO00212 210 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 PMVKQ15126 192 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 CDPF1Q6NVV7 123 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 DUX4L9Q6RFH8 374 aaPredicted RBP6.67□□□□□ -1.34
VPS36-201ENST00000378060 WFDC12Q8WWY7 111 aa6.67□□□□□ -1.34
VPS36-201ENST00000378060 CRPP02741 224 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 SPINK8P0C7L1 97 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 LINC00158P58513 81 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 IL17RELQ6ZVW7 336 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 OR11H6Q8NGC7 330 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 SMIM2Q9BVW6 85 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 253.9 ms