RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 IGHV4-4A0A075B6R2 117 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 GPR183P32249 361 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 ERCC8Q13216 396 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 TRBV7-1A0A0A6YYK4 115 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 RNF223E7ERA6 249 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 C9orf47Q6ZRZ4 202 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 IL17RELQ6ZVW7 336 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 AMN1Q8IY45 258 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 KLHDC1Q8N7A1 406 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 C10orf105Q8TEF2 133 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 BORCS7Q96B45 105 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 DAZAP1Q96EP5 407 aaKnown RBP7.32□□□□□ -1.24
TRIM39-202ENST00000376659 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 THYN1Q9P016 225 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 SS18L2Q9UHA2 77 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 CR1P17927 2039 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 MXRA5Q9NR99 2828 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 D6R8Y8 96 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 K7EQM0 130 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
TRIM39-202ENST00000376659 RIGQ13278 110 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 PET117Q6UWS5 81 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 BOD1L2Q8IYS8 172 aa7.32□□□□□ -1.24
TRIM39-202ENST00000376659 IGHV4-61A0A0C4DH41 118 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 OR4C46A6NHA9 309 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 AAMDCQ9H7C9 122 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 SPTBN4Q9H254 2564 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 IGHV1-69DA0A0B4J2H0 117 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 hDV102S1A0JD36 115 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 IGHV1-69P01742 117 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 TMEM191AQ9H0A3 160 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 ZMAT4Q9H898 229 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 MSRB1Q9NZV6 116 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 ZNF580Q9UK33 172 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 A6NDX4 124 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 SNAI2O43623 268 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 IGLV1-40P01703 118 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 GTF2H5Q6ZYL4 71 aa7.31□□□□□ -1.24
TRIM39-202ENST00000376659 FAM223BA6NKX1 122 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 LEPROTL1O95214 131 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 TRBV12-3P01733 135 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 C8orf86Q6ZUL3 223 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 FAM223AQ8IWN6 122 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 DPF1Q92782 380 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 PGPEP1Q9NXJ5 209 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 MOB4Q9Y3A3 225 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 IGHV3OR16-8A0A075B7F1 116 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 TMEM189A5PLL7 270 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 GAGE10A6NGK3 116 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 NPYP01303 97 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 SCGB1A1P11684 91 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 AGPAT4-IT1Q9H0P7 198 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 GEMIN7Q9H840 131 aaKnown RBP7.3□□□□□ -1.24
TRIM39-202ENST00000376659 SMAD7O15105 426 aaKnown RBP7.3□□□□□ -1.24
TRIM39-202ENST00000376659 IGHV4-38-2P0DP08 117 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 NRACQ8N912 160 aa7.3□□□□□ -1.24
TRIM39-202ENST00000376659 RPL24P83731 157 aaKnown RBP7.29□□□□□ -1.24
TRIM39-202ENST00000376659 ECSCRQ19T08 205 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 UNQ9165/PRO28630Q6UXU0 137 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 SLC50A1Q9BRV3 221 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 IGHG2P01859 326 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 Q6ZS46 218 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 POM121L12Q8N7R1 296 aa7.29□□□□□ -1.24
TRIM39-202ENST00000376659 MCRIP2Q9BUT9 160 aaKnown RBP7.29□□□□□ -1.24
TRIM39-202ENST00000376659 KIR3DS1Q14943 382 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 CLEC19AQ6UXS0 136 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 ARL3P36405 182 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 EEF1AKMT3Q96AZ1 226 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 CHD8Q9HCK8 2581 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 H3BUA1 57 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 TAX1BP3O14907 124 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 AVPP01185 164 aa7.28□□□□□ -1.24
TRIM39-202ENST00000376659 TRAV41A0A0B4J266 112 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 IGHV3-35A0A0C4DH35 117 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 SMKR1H3BMG3 65 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 TRGV3P03979 118 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 MPV17L2Q567V2 206 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 ORMDL3Q8N138 153 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 ZFAND2AQ8N6M9 145 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 ZANQ9Y493 2812 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 PKD1L2Q7Z442 2459 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 LGALS9BQ3B8N2 356 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 LGALS9CQ6DKI2 356 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 PRELID3AQ96N28 172 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 MS4A6AQ9H2W1 248 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 IGHV4-30-2A0A087WSY4 118 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 TRBV7-9A0A0J9YWB2 115 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 SIVA1O15304 175 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 NUDT3O95989 172 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 CSN1S1P47710 185 aa7.27□□□□□ -1.25
TRIM39-202ENST00000376659 SPG11Q96JI7 2443 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 COX8AP10176 69 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 HIST1H1AQ02539 215 aaPredicted RBP7.26□□□□□ -1.25
TRIM39-202ENST00000376659 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 AP1S3Q96PC3 154 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 HSPB8Q9UJY1 196 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 TMSB15BA0A087X1C1 80 aa7.26□□□□□ -1.25
TRIM39-202ENST00000376659 NXPH4O95158 308 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms