RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 TRGV11A0A075B6L2 103 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 A0A087WX48 190 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
PTPN1-201ENST00000371621 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
PTPN1-201ENST00000371621 PROP1O75360 226 aa9.34□□□□□ -0.92
PTPN1-201ENST00000371621 CR1LQ2VPA4 569 aa9.34□□□□□ -0.92
PTPN1-201ENST00000371621 SMRP1Q8NCR6 262 aa9.34□□□□□ -0.92
PTPN1-201ENST00000371621 TRGV9Q99603 122 aa9.34□□□□□ -0.92
PTPN1-201ENST00000371621 COL6A3P12111 3177 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 CIRBPQ14011 172 aaKnown RBP9.33□□□□□ -0.92
PTPN1-201ENST00000371621 Q8N7P7 452 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 SRRM5B3KS81 715 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 Q6ZQT7 251 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 Q8N8P6 123 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 C21orf62Q9NYP8 219 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 IGKV3OR2-268A0A0C4DH90 116 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 A4D1N5 150 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 TRACP01848 142 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 CFC1P0CG37 223 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 B3GALT5-AS1P59052 145 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
PTPN1-201ENST00000371621 PAPPA-AS1Q5QFB9 102 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 NDUFA4L2Q9NRX3 87 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 SPANXA1Q9NS26 97 aa9.33□□□□□ -0.92
PTPN1-201ENST00000371621 TRBV19A0A075B6N1 114 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 DIAPH2-AS1Q14236 149 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
PTPN1-201ENST00000371621 C15orf65H3BRN8 121 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 DEFB109BQ30KR1 87 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 Q8N1Y9 231 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 E7EUB6 86 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 RNASE4P34096 147 aaKnown RBP9.32□□□□□ -0.92
PTPN1-201ENST00000371621 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
PTPN1-201ENST00000371621 Q6ZT83 130 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 TDHQ8IZJ6 230 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 SPRY4Q9C004 299 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 CSPG4Q6UVK1 2322 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 J3KT08 172 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 CNTFRP26992 372 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 UTF1Q5T230 341 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 NFE4Q86UQ8 179 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 TMEM126AQ9H061 195 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 CDX4O14627 284 aaPredicted RBP9.31□□□□□ -0.92
PTPN1-201ENST00000371621 CD3EP07766 207 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 LINC01559Q495D7 138 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 PRR25Q96S07 402 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 TP53TG1Q9Y2A0 90 aa9.31□□□□□ -0.92
PTPN1-201ENST00000371621 NPFFO15130 113 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 PPP1R17O96001 155 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 PIEZO2Q9H5I5 2752 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 LOC107984640A0A0U1RRK4 108 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 P0C879 139 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 NDPQ00604 133 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 RAB1BQ9H0U4 201 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 MUC3AQ02505 3323 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 TMEM167AQ8TBQ9 72 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 TECTAO75443 2155 aa9.3□□□□□ -0.92
PTPN1-201ENST00000371621 A0A087WWL8 130 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 C19orf71A6NCJ1 209 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 CFAP126Q5VTH2 177 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 ZNF493Q6ZR52 646 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 PRR7Q8TB68 274 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 MYO9AB2RTY4 2548 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 TRAV17A0A0B4J275 112 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 CEACAM4O75871 244 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 SRD5A1P18405 259 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 NUP210LQ5VU65 1888 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 LGALS1P09382 135 aaKnown RBP9.29□□□□□ -0.92
PTPN1-201ENST00000371621 METTL26Q96S19 204 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
PTPN1-201ENST00000371621 OOSP1A8MZH6 123 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 DAZAP2Q15038 168 aaPredicted RBP9.28□□□□□ -0.92
PTPN1-201ENST00000371621 TRIP6Q15654 476 aaKnown RBP9.28□□□□□ -0.92
PTPN1-201ENST00000371621 KHDC1LQ5JSQ8 128 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 Q6ZSR3 168 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 FAM110AQ9BQ89 295 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 J3QQQ9 107 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 CITED2Q99967 270 aaPredicted RBP9.28□□□□□ -0.92
PTPN1-201ENST00000371621 LINC00312Q9Y6C7 94 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 WDFY3Q8IZQ1 3526 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 PTPRQQ9UMZ3 2332 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 GATD1Q8NB37 220 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 PLEKHB2Q96CS7 222 aa9.28□□□□□ -0.92
PTPN1-201ENST00000371621 CDIP1Q9H305 208 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 TOMM7Q9P0U1 55 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 KIAA1549LQ6ZVL6 1849 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 TIMM23O14925 209 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 PRB1P04280 392 aa9.27□□□□□ -0.93
PTPN1-201ENST00000371621 HERVK_113P63121 156 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms