RNA–Protein interactions for RNA: ENST00000370563.3

CLCA4-201, Transcript of chloride channel accessory 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA4, Length 3,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-201ENST00000370563 KIR3DP1A8MWS1 328 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 SLC25A5P05141 298 aaKnown RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CCL3P10147 92 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 BPIFA4PQ86YQ2 179 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF101Q8IZC7 436 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 ZFP62Q8NB50 900 aaPredicted RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 DPH3Q96FX2 82 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 MIEN1Q9BRT3 115 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 SLC39A9Q9NUM3 307 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 EPDR1Q9UM22 224 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 LINC00588Q9Y4M8 146 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 TDRD6O60522 2096 aaKnown RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 IGHV3-21A0A0B4J1V1 117 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 TRGV3P03979 118 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 T-ENOLP0DO92 83 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 NPPCP23582 126 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF93P35789 620 aaPredicted RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 YPEL3P61236 119 aaPredicted RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 SYCNQ0VAF6 134 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CATR1Q13166 79 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 ALKAL2Q6UX46 152 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CD177Q8N6Q3 437 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 GABARAPL1Q9H0R8 117 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 C11orf1Q9H5F2 150 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 RERGLQ9H628 205 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CCDC167Q9P0B6 97 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 NOTCH2Q04721 2471 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CROCCQ5TZA2 2017 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 A0A087WXM4 84 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 A0A0J9YW62 118 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 TRBV27A0A0K0K1C4 114 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 IGKV1D-33P01593 117 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 IGKV1-33P01594 117 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 IGHV4-34P06331 123 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CFC1P0CG37 223 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 TPPP2P59282 170 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 MYL5Q02045 173 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 RPL18Q07020 188 aaKnown RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF705AQ6ZN79 300 aaPredicted RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 CCL4L1Q8NHW4 92 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 YPEL2Q96QA6 119 aa2.36□□□□□ -2.03
CLCA4-201ENST00000370563 SETXQ7Z333 2677 aaKnown RBP2.36□□□□□ -2.03
CLCA4-201ENST00000370563 DSCAMO60469 2012 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 PTPRQQ9UMZ3 2332 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 ADAMTS9Q9P2N4 1935 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 PIKFYVEQ9Y2I7 2098 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 TNRC6BQ9UPQ9 1833 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 OR2T8A6NH00 312 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 C11orf94C9JXX5 98 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 CFDP00746 253 aaPredicted RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 HMGA1P17096 107 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 NUP205Q92621 2012 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 RBMXL1Q96E39 390 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 MCEEQ96PE7 176 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 HELZ2Q9BYK8 2649 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 SMCO4Q9NRQ5 59 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 A0A1W2PRS3 328 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 A6NED7 52 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 K7ERS5 55 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 CD14P08571 375 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 SNRPD3P62318 126 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 SPANXN3Q5MJ09 141 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
CLCA4-201ENST00000370563 GFI1BQ5VTD9 330 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 PCP2Q8IVA1 136 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 LINC00301Q8NCQ3 95 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 CNTRLQ7Z7A1 2325 aa2.35□□□□□ -2.03
CLCA4-201ENST00000370563 IGKV3D-20A0A0C4DH25 116 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 A0A0D9SG52 128 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 NDUFB3O43676 98 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 RPL27AP46776 148 aaKnown RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 C16orf47Q6ZP98 133 aaPredicted RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 MORN4Q8NDC4 146 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF431Q8TF32 576 aaPredicted RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 PLXNA2O75051 1894 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF462Q96JM2 2506 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 HIST1H2BKO60814 126 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 HIST1H2BJP06899 126 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 IGLC1P0CG04 106 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 HLA-DRB4P13762 266 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 UBA52P62987 128 aaKnown RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 TDRG1Q3Y452 100 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 Q5W150 140 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ATOH7Q8N100 152 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 PRELID3AQ96N28 172 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 NPCDR1Q9BY65 106 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 OSTCQ9NRP0 149 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF222Q9UK12 451 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ZNF443Q9Y2A4 671 aaPredicted RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 HLA-DRB4X5D2U9 266 aa2.34□□□□□ -2.03
CLCA4-201ENST00000370563 ARID1BQ8NFD5 2236 aaPredicted RBP2.34□□□□□ -2.03
CLCA4-201ENST00000370563 RP1P56715 2156 aa2.34□□□□□ -2.04
CLCA4-201ENST00000370563 LECT2O14960 151 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms