RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 TRBV20OR9-2A0A075B6H5 130 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 A0A0A6YYD4 124 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 A0A1B0GXF2 115 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 BGLAPP02818 100 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 HMGN2P05204 90 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ASAH2BP0C7U1 165 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 CSN1S1P47710 185 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 PAX8Q06710 450 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ZC2HC1BQ5TFG8 222 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ZNF493Q6ZR52 646 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 URB1-AS1Q96HZ7 61 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 TTTY10Q9BZA0 68 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 VPS13AQ96RL7 3174 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 LYRM9A8MSI8 78 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 EGR2P11161 476 aaPredicted RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 SUMO2P61956 95 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ACP7Q6ZNF0 438 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 NT5CQ8TCD5 201 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 PATE1Q8WXA2 126 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 FAM19A4Q96LR4 140 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ESM1Q9NQ30 184 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 SCN3AQ9NY46 2000 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 FLNCQ14315 2725 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ARHGAP21Q5T5U3 1957 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 TRAV4A0A0B4J268 109 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 RBMY1BA6NDE4 496 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 RBMY1EA6NEQ0 496 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 EPM2AB3EWF7 344 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 LYZL6O75951 148 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 RBMY1DP0C7P1 496 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 PIRTP0C851 137 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 RBMY1A1P0DJD3 496 aaKnown RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 SCGB1C2P0DMR2 95 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 DSCR4P56555 118 aaPredicted RBP3.93□□□□□ -1.78
UBE3D-202ENST00000369746 UNQ9165/PRO28630Q6UXU0 137 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 FAM215AQ9Y5M1 114 aa3.93□□□□□ -1.78
UBE3D-202ENST00000369746 ZGRF1Q86YA3 2104 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 IGKV1D-8A0A087WSZ0 117 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 C15orf62A8K5M9 175 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 IGKV1D-33P01593 117 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 IGKV1-33P01594 117 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 P0DMU3 169 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 FAM231AP0DMU4 169 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 FAM231CP0DMU5 169 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 COX7CP15954 63 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 CXCL5P42830 114 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 FXYD2P54710 66 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 UBE2D3P61077 147 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 UBE2D2P62837 147 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 CENPWQ5EE01 88 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 Q75L30 129 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 ARHGAP5-AS1Q96IT6 56 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 CHAC1Q9BUX1 264 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 NBPF19A0A087WUL8 3843 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 FRYLO94915 3013 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 ACYP1P07311 99 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 NCBP2P52298 156 aaKnown RBP eCLIP3.92□□□□□ -1.78
UBE3D-202ENST00000369746 VMA21Q3ZAQ7 101 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 LINC00311Q8N616 119 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 LHFPL6Q9Y693 200 aa3.92□□□□□ -1.78
UBE3D-202ENST00000369746 A8MWL6 223 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 DEFB108AA8MXU0 73 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 SYNGR2O43760 224 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 MRPL2Q5T653 305 aaKnown RBP3.91□□□□□ -1.78
UBE3D-202ENST00000369746 C6orf201Q7Z4U5 140 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 OR5AS1Q8N127 324 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 RPRMLQ8N4K4 120 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 ZNF441Q8N8Z8 693 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 OR52N5Q8NH56 324 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 C11orf68Q9H3H3 251 aaKnown RBP3.91□□□□□ -1.78
UBE3D-202ENST00000369746 FAM60AQ9NP50 221 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 F11RQ9Y624 299 aaKnown RBP3.91□□□□□ -1.78
UBE3D-202ENST00000369746 A0A1B0GWA3 101 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 TMEM30BQ3MIR4 351 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 DEFB121Q5J5C9 76 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 Q6ZS46 218 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 GTSCR1Q86UQ5 136 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 RPS19BP1Q86WX3 136 aaKnown RBP3.91□□□□□ -1.78
UBE3D-202ENST00000369746 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 PCP2Q8IVA1 136 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 GFRA4Q9GZZ7 299 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 C19orf73Q9NVV2 129 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 PSENENQ9NZ42 101 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
UBE3D-202ENST00000369746 DYSFO75923 2080 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 SPTBN1Q01082 2364 aaKnown RBP3.9□□□□□ -1.78
UBE3D-202ENST00000369746 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 C3orf84H3BNL1 204 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 TRACP01848 142 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 IL4P05112 153 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 FAM19A3Q7Z5A8 133 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 C11orf53Q8IXP5 236 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 ZNF799Q96GE5 643 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 ODF3Q96PU9 254 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 SLC25A22Q9H936 323 aa3.9□□□□□ -1.78
UBE3D-202ENST00000369746 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.78
UBE3D-202ENST00000369746 FN1P02751 2386 aaKnown RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms