RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ROCK1Q13464 1354 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 DLEC1Q9Y238 1755 aa0.17□□□□□ -2.38
RNU6-560P-201ENST00000364007 TANC1Q9C0D5 1861 aa0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 TPT1P13693 172 aaKnown RBP0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 TMEM78Q5T7P6 136 aa0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 HRCT1Q6UXD1 115 aa0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 PBRM1Q86U86 1689 aa0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 SYNE1Q8NF91 8797 aaKnown RBP0.16□□□□□ -2.38
RNU6-560P-201ENST00000364007 BDP1A6H8Y1 2624 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 PRORSD1PA6NEY8 169 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 E5RI56 91 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 EVI2AP22794 236 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 FXYD3Q14802 87 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 LINC00305Q7Z4B0 112 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 TCTEX1D1Q8N7M0 179 aa0.15□□□□□ -2.39
RNU6-560P-201ENST00000364007 NBDYA0A0U1RRE5 68 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 A0A1W2PPB8 328 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 BBIP1A8MTZ0 92 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 KIR3DP1A8MWS1 328 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 GYPBP06028 91 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 SAA1P0DJI8 122 aaPredicted RBP0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 ZNF56Q15929 161 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 ASB16-AS1Q495Z4 193 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 TMEM229BQ8NBD8 167 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 LAMTOR2Q9Y2Q5 125 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 GPR98Q8WXG9 6306 aa0.14□□□□□ -2.39
RNU6-560P-201ENST00000364007 TRBV27A0A0K0K1C4 114 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 LOC101927531A0A1B0GV80 90 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 A0A1W2PRE2 83 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 ARL5CA6NH57 179 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 RPL37P61927 97 aaKnown RBP0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 SPINK6Q6UWN8 80 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 C3orf62Q6ZUJ4 267 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 MORN4Q8NDC4 146 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 PCBD2Q9H0N5 130 aa0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 PTPRZ1P23471 2315 aaPredicted RBP0.13□□□□□ -2.39
RNU6-560P-201ENST00000364007 PLXNA2O75051 1894 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 TRAV13-1A0A0B4J241 112 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 LOC107986453A0A1B0GWG9 222 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 SPINK13Q1W4C9 94 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 C5orf56Q8N8D9 126 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 OR51A4Q8NGJ6 313 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 CCDC32Q9BV29 185 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 MRPL35Q9NZE8 188 aaKnown RBP0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 COMMD3Q9UBI1 195 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 MED31Q9Y3C7 131 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 MPC1Q9Y5U8 109 aa0.12□□□□□ -2.39
RNU6-560P-201ENST00000364007 MED13LQ71F56 2210 aa0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 CDC42EP2O14613 210 aa0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 EDF1O60869 148 aaKnown RBP0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 MRPL36Q9P0J6 103 aaKnown RBP0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 IGF2RP11717 2491 aa0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 KIDINS220Q9ULH0 1771 aa0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 TPRP12270 2363 aaKnown RBP0.11□□□□□ -2.39
RNU6-560P-201ENST00000364007 LRP5O75197 1615 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 FXYD1O00168 92 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 SLC25A4P12235 298 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 CRYGSP22914 178 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 DNAJB13P59910 316 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 THEM6Q8WUY1 208 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 LXNQ9BS40 222 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 TRAPPC2LQ9UL33 140 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 CACNA1HO95180 2353 aa0.1□□□□□ -2.39
RNU6-560P-201ENST00000364007 WDR97A6NE52 1622 aa0.09□□□□□ -2.39
RNU6-560P-201ENST00000364007 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 TRBV7-6A0A0J9YX20 115 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 LOC107984640A0A0U1RRK4 108 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 H3BMG7 143 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 M0QZK8 103 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 IGF2P01344 180 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 IGKCP01834 107 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 IL7P13232 177 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 POLR2HP52434 150 aaKnown RBP0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 DEFB132Q7Z7B7 95 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 OR8J3Q8NGG0 315 aa0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 CDK12Q9NYV4 1490 aaPredicted RBP0.09□□□□□ -2.4
RNU6-560P-201ENST00000364007 TMEM30CPA0ZSE6 113 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 E7EQ34 232 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 RPL7P18124 248 aaKnown RBP0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 GTF2A1P52655 376 aaPredicted RBP0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 BLCAPP62952 87 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 CCSMST1Q4G0I0 132 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 CBLN4Q9NTU7 201 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 ATPIF1Q9UII2 106 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 KDM6BO15054 1643 aa0.08□□□□□ -2.4
RNU6-560P-201ENST00000364007 SYNE2Q8WXH0 6885 aaKnown RBP0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 PFDN1O60925 122 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 CD3DP04234 171 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 LYPD5Q6UWN5 251 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 BRK1Q8WUW1 75 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 ZCCHC6Q5VYS8 1495 aaKnown RBP0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 FSIP2Q5CZC0 6907 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 ABCA4P78363 2273 aa0.07□□□□□ -2.4
RNU6-560P-201ENST00000364007 SPAG17Q6Q759 2223 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 A2MP01023 1474 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 TMEM189A5PLL7 270 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 IFITM5A6NNB3 132 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 HIGD1CA8MV81 97 aa0.06□□□□□ -2.4
RNU6-560P-201ENST00000364007 TPST1O60507 370 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms