RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 SIGLEC15Q6ZMC9 328 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 TMEM238LA0A1B0GVL6 79 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 A6NJY4 79 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 ATP5G2Q06055 141 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 NCOR1P1Q9H4R4 102 aa10.77□□□□□ -0.69
SGMS1-202ENST00000361781 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 TNFRSF14Q92956 283 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 C19orf71A6NCJ1 209 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 TSSC4Q9Y5U2 329 aaPredicted RBP10.76□□□□□ -0.69
SGMS1-202ENST00000361781 KALRNO60229 2985 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 H3BRN7 92 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
SGMS1-202ENST00000361781 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
SGMS1-202ENST00000361781 LAGE3Q14657 143 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 VMO1Q7Z5L0 202 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 KLF12Q9Y4X4 402 aa10.76□□□□□ -0.69
SGMS1-202ENST00000361781 ABCA2Q9BZC7 2435 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 K7EIM0 57 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 K7EP34 96 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 FXYD2P54710 66 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 ZNF56Q15929 161 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 LGALS9CQ6DKI2 356 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 MLST8Q9BVC4 326 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
SGMS1-202ENST00000361781 TACC2O95359 2948 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
SGMS1-202ENST00000361781 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 DTX2Q86UW9 622 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 ASIPP42127 132 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
SGMS1-202ENST00000361781 PLA2G2CQ5R387 149 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 FAM159AQ6UWV7 190 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 DYNAPQ8N1N2 210 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 PRSS22Q9GZN4 317 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
SGMS1-202ENST00000361781 I3L2K1 104 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 LINC00311Q8N616 119 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 LYRM7Q5U5X0 104 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 KIR2DL4Q99706 377 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 BRD3OSQ6XYD6 125 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 TMEM14CQ9P0S9 112 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 SMG1Q96Q15 3661 aaKnown RBP10.73□□□□□ -0.69
SGMS1-202ENST00000361781 ADGRG4Q8IZF6 3080 aa10.73□□□□□ -0.69
SGMS1-202ENST00000361781 A0A1B0GV72 72 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 LGALS3P17931 250 aaKnown RBP10.72□□□□□ -0.69
SGMS1-202ENST00000361781 PRAC2D3DTV9 90 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 THBDP07204 575 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 DEFB1P60022 68 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 C3orf36Q3SXR2 165 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 CSTL1Q9H114 145 aa10.72□□□□□ -0.69
SGMS1-202ENST00000361781 ZNF562Q6V9R5 426 aa10.71□□□□□ -0.69
SGMS1-202ENST00000361781 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
SGMS1-202ENST00000361781 CD7P09564 240 aa10.71□□□□□ -0.69
SGMS1-202ENST00000361781 RAB9AP51151 201 aa10.71□□□□□ -0.69
SGMS1-202ENST00000361781 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.7
SGMS1-202ENST00000361781 A0A087WWL8 130 aa10.71□□□□□ -0.7
SGMS1-202ENST00000361781 FOXE3Q13461 319 aa10.71□□□□□ -0.7
SGMS1-202ENST00000361781 PDE6HQ13956 83 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 WFDC2Q14508 124 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 SLC50A1Q9BRV3 221 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 ATP6V0E1O15342 81 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 AGRNO00468 2067 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 AZU1P20160 251 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 CRIP1P50238 77 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 ZNF80P51504 273 aaPredicted RBP10.7□□□□□ -0.7
SGMS1-202ENST00000361781 CFHR4Q92496 578 aa10.7□□□□□ -0.7
SGMS1-202ENST00000361781 TRAV2A0A0B4J234 112 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 IGKV3D-20A0A0C4DH25 116 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 RAX2Q96IS3 184 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 PTPRBP23467 1997 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 A0A0U1RRA0 63 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 NPC2P61916 151 aa10.69□□□□□ -0.7
SGMS1-202ENST00000361781 POLQO75417 2590 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 CRYGCP07315 174 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 PAX8Q06710 450 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 HIVEP3Q5T1R4 2406 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 F6UB75 175 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 SLC25A16P16260 332 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 PRTN3P24158 256 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 IGHV3OR16-12A0A075B7B8 117 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
SGMS1-202ENST00000361781 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
SGMS1-202ENST00000361781 IGHV4-39P01824 125 aa10.67□□□□□ -0.7
SGMS1-202ENST00000361781 C1orf122Q6ZSJ8 110 aa10.67□□□□□ -0.7
SGMS1-202ENST00000361781 SHISA9B4DS77 424 aa10.67□□□□□ -0.7
SGMS1-202ENST00000361781 H7C1H1 209 aa10.67□□□□□ -0.7
SGMS1-202ENST00000361781 IGLV1-47P01700 117 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms