RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CFC1P0CG37 223 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 HTN3P15516 51 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 IGF2BP2-AS1Q96M15 143 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 C8orf86Q6ZUL3 223 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 Q6ZSR3 168 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
SPAST-202ENST00000345662 A0A1W2PRX2 142 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 IGHG4P01861 327 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 DENND4AQ7Z401 1863 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 ZNF407Q9C0G0 2248 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 G3V4G9 280 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 PRSS29PA6NIE9 313 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 ANXA2RQ3ZCQ2 193 aa13.87□□□□□ -0.19
SPAST-202ENST00000345662 COL8A2P25067 703 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 CD59P13987 128 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 CADP27708 2225 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 WFDC2Q14508 124 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 SPTBN2O15020 2390 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 OVOL3O00110 214 aa13.86□□□□□ -0.19
SPAST-202ENST00000345662 K7EMI3 77 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 IGHV3-53P01767 116 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 EGR2P11161 476 aaPredicted RBP13.85□□□□□ -0.19
SPAST-202ENST00000345662 ZNF491Q8N8L2 437 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 DPH3Q96FX2 82 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 A0A0G2JNJ9 132 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 Q9UFV3 132 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 FXYD2P54710 66 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 C17orf77Q96MU5 243 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 HIGD1BQ9P298 99 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 NCOR1O75376 2440 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 FNDC1Q4ZHG4 1894 aaPredicted RBP13.85□□□□□ -0.19
SPAST-202ENST00000345662 CACNA1GO43497 2377 aa13.85□□□□□ -0.19
SPAST-202ENST00000345662 H3BUX3 64 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 RHODO00212 210 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 THADAQ6YHU6 1953 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 ATP6V0E1O15342 81 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 SMIM20Q8N5G0 67 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 INSP01308 110 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 LOXP28300 417 aaPredicted RBP13.84□□□□□ -0.19
SPAST-202ENST00000345662 DTX1Q86Y01 620 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 UBL5Q9BZL1 73 aa13.84□□□□□ -0.19
SPAST-202ENST00000345662 TEX36Q5VZQ5 186 aa13.83□□□□□ -0.19
SPAST-202ENST00000345662 C11orf1Q9H5F2 150 aa13.83□□□□□ -0.19
SPAST-202ENST00000345662 ZNF493Q6ZR52 646 aa13.83□□□□□ -0.2
SPAST-202ENST00000345662 TEN1Q86WV5 123 aa13.83□□□□□ -0.2
SPAST-202ENST00000345662 C3orf36Q3SXR2 165 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 FGF23Q9GZV9 251 aaPredicted RBP13.82□□□□□ -0.2
SPAST-202ENST00000345662 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 FRMD6-AS1P0C7T7 363 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 SAA4P35542 130 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 CRYBA4P53673 196 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 DIAPH2-AS1Q14236 149 aa13.82□□□□□ -0.2
SPAST-202ENST00000345662 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
SPAST-202ENST00000345662 CREBBPQ92793 2442 aa13.81□□□□□ -0.2
SPAST-202ENST00000345662 CMC4P56277 68 aaPredicted RBP13.81□□□□□ -0.2
SPAST-202ENST00000345662 TMEM126AQ9H061 195 aa13.81□□□□□ -0.2
SPAST-202ENST00000345662 E7EQL1 145 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 CACNA1HO95180 2353 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 GP9P14770 177 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 MSRB2Q9Y3D2 182 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 IGLV1-44P01699 117 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 PIP4P2Q8N4L2 257 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 GTSF1Q8WW33 167 aa13.8□□□□□ -0.2
SPAST-202ENST00000345662 ACYP1P07311 99 aa13.79□□□□□ -0.2
SPAST-202ENST00000345662 GATA1P15976 413 aaPredicted RBP13.79□□□□□ -0.2
SPAST-202ENST00000345662 FOXI1Q12951 378 aa13.79□□□□□ -0.2
SPAST-202ENST00000345662 SPINK13Q1W4C9 94 aa13.79□□□□□ -0.2
SPAST-202ENST00000345662 SPTAN1Q13813 2472 aaKnown RBP13.79□□□□□ -0.2
SPAST-202ENST00000345662 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 SS18Q15532 418 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 LY6HO94772 140 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 KRTAP27-1Q3LI81 207 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 PATE2Q6UY27 113 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 C11orf53Q8IXP5 236 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 CFHR4Q92496 578 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 FAM167A-AS1Q96KT0 104 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 TRAV13-2A0A0B4J235 113 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 G3V318 75 aa13.78□□□□□ -0.2
SPAST-202ENST00000345662 IGLV3-9A0A075B6K5 115 aa13.77□□□□□ -0.2
SPAST-202ENST00000345662 C2orf70A6NJV1 201 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 SRSF2Q01130 221 aaKnown RBP13.77□□□□□ -0.21
SPAST-202ENST00000345662 TRAV26-1A0A087WT03 109 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 IGHV1-69DA0A0B4J2H0 117 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 UBE2E2Q96LR5 201 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 TTTY13Q9BZ97 58 aa13.77□□□□□ -0.21
SPAST-202ENST00000345662 AGPAT4-IT1Q9H0P7 198 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 DEFB131AP59861 70 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 KMT2EQ8IZD2 1858 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 RBAKDNA6NC62 111 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 PFN2P35080 140 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 UBE2E1P51965 193 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 ACACAQ13085 2346 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 NOTCH3Q9UM47 2321 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 NDUFA4O00483 81 aa13.76□□□□□ -0.21
SPAST-202ENST00000345662 HAMPP81172 84 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms