RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 IGLL1P15814 213 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 CRISP2P16562 243 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 ZFAND2AQ8N6M9 145 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 ODF3Q96PU9 254 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 SMCO4Q9NRQ5 59 aa12.11□□□□□ -0.47
CEACAM1-202ENST00000344391 PKD1L1Q8TDX9 2849 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 CXorf65A6NEN9 183 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 A8MTW9 85 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 H3BMM0 161 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 CD7P09564 240 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 MDFIQ99750 246 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
CEACAM1-202ENST00000344391 GATCO43716 136 aaKnown RBP12.09□□□□□ -0.47
CEACAM1-202ENST00000344391 FAM162BQ5T6X4 162 aa12.09□□□□□ -0.47
CEACAM1-202ENST00000344391 PRR9Q5T870 116 aa12.09□□□□□ -0.47
CEACAM1-202ENST00000344391 C19orf73Q9NVV2 129 aa12.09□□□□□ -0.47
CEACAM1-202ENST00000344391 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 SH2D1AO60880 128 aa12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 P01737 135 aa12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 AMTNQ6UX39 209 aa12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 RPP21Q9H633 154 aaKnown RBP12.08□□□□□ -0.48
CEACAM1-202ENST00000344391 KLLNB2CW77 178 aa12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 GPX1P07203 203 aa12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 LEPP41159 167 aa12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
CEACAM1-202ENST00000344391 RBMY1BA6NDE4 496 aaKnown RBP12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 RBMY1EA6NEQ0 496 aaKnown RBP12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 J3KRW8 73 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 CA1P00915 261 aaPredicted RBP12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 RBMY1DP0C7P1 496 aaKnown RBP12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 CT83Q5H943 113 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 PRR31Q5SQ13 230 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 YPEL4Q96NS1 127 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 IMMP2LQ96T52 175 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 IL36BQ9NZH7 164 aa12.06□□□□□ -0.48
CEACAM1-202ENST00000344391 TSPOP30536 169 aa12.05□□□□□ -0.48
CEACAM1-202ENST00000344391 CDKN1BP46527 198 aa12.05□□□□□ -0.48
CEACAM1-202ENST00000344391 OR2D3Q8NGH3 330 aa12.05□□□□□ -0.48
CEACAM1-202ENST00000344391 URGCP-MRPS24S4R325 110 aa12.05□□□□□ -0.48
CEACAM1-202ENST00000344391 M0R2Z0 102 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 RNASE4P34096 147 aaKnown RBP12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 ELOBQ15370 118 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 SPINK13Q1W4C9 94 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 Q6AWC8 147 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 Q6ZQT7 251 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 STHQ8IWL8 128 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 WFDC10AQ9H1F0 79 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 TRAV21A0A0B4J279 112 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 SMIM27A0A1W2PRY6 76 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 RPL19P84098 196 aaKnown RBP12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 TRPT1Q86TN4 253 aaKnown RBP12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 TSKUQ8WUA8 353 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 C11orf21Q9P2W6 132 aa12.04□□□□□ -0.48
CEACAM1-202ENST00000344391 TMEM189A5PLL7 270 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 A8MWL6 223 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 S100PP25815 95 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 FAM3BP58499 235 aaPredicted RBP12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 LINC01559Q495D7 138 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 GFI1BQ5VTD9 330 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 KCNIP4Q6PIL6 250 aa12.03□□□□□ -0.48
CEACAM1-202ENST00000344391 C7orf71A4D174 169 aa12.02□□□□□ -0.49
CEACAM1-202ENST00000344391 COLCA2A8K830 154 aa12.02□□□□□ -0.49
CEACAM1-202ENST00000344391 ORM1P02763 201 aa12.02□□□□□ -0.49
CEACAM1-202ENST00000344391 OXLD1Q5BKU9 147 aa12.02□□□□□ -0.49
CEACAM1-202ENST00000344391 ZNF575Q86XF7 245 aa12.02□□□□□ -0.49
CEACAM1-202ENST00000344391 TRAV12-2A0A075B6T6 113 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 IGKV3D-20A0A0C4DH25 116 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 CRXO43186 299 aaPredicted RBP12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 ZNF324O75467 553 aaPredicted RBP12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 TCL1AP56279 114 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 FXYD7P58549 80 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 NEU1Q99519 415 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 GFRA4Q9GZZ7 299 aa12.01□□□□□ -0.49
CEACAM1-202ENST00000344391 TMSB15BA0A087X1C1 80 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 TRAV12-3A0A0B4J271 114 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 A0A1W2PPQ1 181 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 FAM231BA6NCW3 169 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 GZMBP10144 247 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 DEFB125Q8N687 156 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 GTSF1Q8WW33 167 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 CXCL1P09341 107 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 RPS20P60866 119 aaKnown RBP12□□□□□ -0.49
CEACAM1-202ENST00000344391 Q8N1Y9 231 aa12□□□□□ -0.49
CEACAM1-202ENST00000344391 SREK1IP1Q8N9Q2 155 aaPredicted RBP12□□□□□ -0.49
CEACAM1-202ENST00000344391 TRAV9-1A0A075B6T8 112 aa11.99□□□□□ -0.49
CEACAM1-202ENST00000344391 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
CEACAM1-202ENST00000344391 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
CEACAM1-202ENST00000344391 RIPPLY3P57055 190 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms