RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 RS1O15537 224 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 MALP21145 153 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 CTRLP40313 264 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 C20orf78Q9BR46 151 aa10.97□□□□□ -0.65
TRIO-202ENST00000344204 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
TRIO-202ENST00000344204 C3orf22Q8N5N4 141 aa10.96□□□□□ -0.65
TRIO-202ENST00000344204 UQCRQO14949 82 aa10.96□□□□□ -0.65
TRIO-202ENST00000344204 PRIMA1Q86XR5 153 aa10.96□□□□□ -0.65
TRIO-202ENST00000344204 FOXG1P55316 489 aaPredicted RBP10.96□□□□□ -0.65
TRIO-202ENST00000344204 COL4A5P29400 1685 aa10.96□□□□□ -0.65
TRIO-202ENST00000344204 BRK1Q8WUW1 75 aa10.96□□□□□ -0.66
TRIO-202ENST00000344204 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.66
TRIO-202ENST00000344204 NDUFA12Q9UI09 145 aa10.96□□□□□ -0.66
TRIO-202ENST00000344204 ICOSQ9Y6W8 199 aa10.96□□□□□ -0.66
TRIO-202ENST00000344204 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 FAM201AQ5SY85 155 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 ERCC8Q13216 396 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 TFF2Q03403 129 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 LINC01587Q99440 93 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 SRRM4A7MD48 611 aaKnown RBP10.95□□□□□ -0.66
TRIO-202ENST00000344204 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.95□□□□□ -0.66
TRIO-202ENST00000344204 HERVK_113P63121 156 aa10.95□□□□□ -0.66
TRIO-202ENST00000344204 E9PLD3 99 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 K7EMI3 77 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 SPATA25Q9BR10 227 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 MYOD1P15172 320 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 C3orf36Q3SXR2 165 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 FAM110AQ9BQ89 295 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 CLPSP04118 112 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 MRPL14Q6P1L8 145 aaKnown RBP10.94□□□□□ -0.66
TRIO-202ENST00000344204 TRAV26-2A0A0B4J265 109 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 TMEM167AQ8TBQ9 72 aa10.94□□□□□ -0.66
TRIO-202ENST00000344204 TRAV12-1A0A0B4J245 112 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 HS3ST6Q96QI5 342 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 TRBV19A0A075B6N1 114 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 GTSF1Q8WW33 167 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 ADARB2-AS1A8MUL3 147 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 A0A087WWL8 130 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 M0QXV9 152 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
TRIO-202ENST00000344204 CCL3L1P16619 93 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 EFNA4P52798 201 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 LRRK2Q5S007 2527 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 ZNF876PQ49A33 203 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 ZNF576Q9H609 170 aa10.93□□□□□ -0.66
TRIO-202ENST00000344204 CCDC179H3BU77 68 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 NTN3O00634 580 aaPredicted RBP10.92□□□□□ -0.66
TRIO-202ENST00000344204 FAM120AOSQ5T036 256 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 C2orf70A6NJV1 201 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 M0R1W7 72 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 SRRM5B3KS81 715 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 IGHG2P01859 326 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 DTX2Q86UW9 622 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 LINC00477Q96M19 166 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 ACANP16112 2415 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 TIMM23O14925 209 aa10.92□□□□□ -0.66
TRIO-202ENST00000344204 LINC00205P59089 165 aa10.91□□□□□ -0.66
TRIO-202ENST00000344204 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
TRIO-202ENST00000344204 PRDM6Q9NQX0 595 aa10.91□□□□□ -0.66
TRIO-202ENST00000344204 E9PLN8 166 aa10.91□□□□□ -0.66
TRIO-202ENST00000344204 CRYGBP07316 175 aa10.91□□□□□ -0.66
TRIO-202ENST00000344204 DSCR8Q96T75 97 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 F8P00451 2351 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 IGKV3D-7A0A0C4DH55 119 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 IGHV1-2P23083 117 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 TMEM219Q86XT9 240 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 NDUFA4L2Q9NRX3 87 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 DUSP14O95147 198 aaKnown RBP10.9□□□□□ -0.66
TRIO-202ENST00000344204 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 MRPL55Q7Z7F7 128 aaKnown RBP10.9□□□□□ -0.66
TRIO-202ENST00000344204 H3BT86 120 aa10.9□□□□□ -0.66
TRIO-202ENST00000344204 NEU4Q8WWR8 484 aaPredicted RBP10.9□□□□□ -0.67
TRIO-202ENST00000344204 A0A0U1RQV1 116 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 ODF1Q14990 250 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 TRBV10-2A0A0K0K1G8 114 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 EFNA2O43921 213 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 HAMPP81172 84 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 SLC25A45Q8N413 288 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 ARRDC1-AS1Q9H2J1 176 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 I3L3M4 83 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
TRIO-202ENST00000344204 TINCRA0A1B0GVN0 87 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 TCL1BO95988 128 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 GGNQ86UU5 652 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 NOTCH2Q04721 2471 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 IGHV3-73A0A0B4J1V6 119 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 C1orf159Q96HA4 380 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 B9A039 149 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 PAX8Q06710 450 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 TP73-AS1Q9UF72 201 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 PKIGQ9Y2B9 76 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 SIGLEC9Q9Y336 463 aa10.88□□□□□ -0.67
TRIO-202ENST00000344204 C9orf139Q6ZV77 190 aa10.87□□□□□ -0.67
TRIO-202ENST00000344204 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
TRIO-202ENST00000344204 Q6ZR03 302 aa10.87□□□□□ -0.67
TRIO-202ENST00000344204 THAP8Q8NA92 274 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms