RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 ZNF843Q8N446 348 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 PHLDA1Q8WV24 401 aaPredicted RBP9.24□□□□□ -0.93
RBM39-202ENST00000338163 ATP6V0BQ99437 205 aa9.24□□□□□ -0.93
RBM39-202ENST00000338163 SPAG8Q99932 426 aaPredicted RBP9.24□□□□□ -0.93
RBM39-202ENST00000338163 F8W1H4 67 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 NDUFA3O95167 84 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 CRYGBP07316 175 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 BSPH1Q075Z2 132 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 HIGD1BQ9P298 99 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 USP9XQ93008 2570 aaPredicted RBP9.23□□□□□ -0.93
RBM39-202ENST00000338163 LRRK2Q5S007 2527 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 C16orf97H3BN30 126 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 DLX6P56179 175 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 CCDC144NLQ6NUI1 221 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
RBM39-202ENST00000338163 RAB9AP51151 201 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 GAGE13Q4V321 117 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
RBM39-202ENST00000338163 UFC1Q9Y3C8 167 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 TRAV26-2A0A0B4J265 109 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 E9PLD3 99 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 BUB1B-PAK6H3BSN5 160 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
RBM39-202ENST00000338163 HES1Q14469 280 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 TTC9CQ8N5M4 171 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 C8orf31Q8N9H6 132 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
RBM39-202ENST00000338163 A0A1B0GWB2 263 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 FAM90A27PA6NNH2 459 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 LYNX1G3V0Z9 82 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 LYNX1P0DP58 116 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 C12orf74Q32Q52 190 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 TM2D2Q9BX73 214 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 KLK15Q9H2R5 256 aa9.21□□□□□ -0.93
RBM39-202ENST00000338163 ASH1LQ9NR48 2969 aaKnown RBP9.21□□□□□ -0.93
RBM39-202ENST00000338163 ABCA4P78363 2273 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 NDUFS8O00217 210 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 TIMM23O14925 209 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 CEACAM3P40198 252 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 CKS1BP61024 79 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 ERCC8Q13216 396 aa9.21□□□□□ -0.94
RBM39-202ENST00000338163 MED13LQ71F56 2210 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 ADORA2A-AS1P86434 159 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 PDE6HQ13956 83 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 NCBP2LA6PVI3 153 aaKnown RBP9.2□□□□□ -0.94
RBM39-202ENST00000338163 IGLV1-47P01700 117 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 IGLC6P0CF74 106 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 SCGB1A1P11684 91 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 EFNA4P52798 201 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 DTX2Q86UW9 622 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 NUP37Q8NFH4 326 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 MYOZ3Q8TDC0 251 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 ZMAT4Q9H898 229 aa9.2□□□□□ -0.94
RBM39-202ENST00000338163 ANKHD1Q8IWZ3 2542 aaKnown RBP9.2□□□□□ -0.94
RBM39-202ENST00000338163 ATP5LO75964 103 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 SCGB2A2Q13296 93 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 CDSNQ15517 529 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 DCHS2Q6V1P9 2916 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 UTP20O75691 2785 aaKnown RBP9.19□□□□□ -0.94
RBM39-202ENST00000338163 APOMO95445 188 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 TRGV3P03979 118 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 ONECUT1Q9UBC0 465 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
RBM39-202ENST00000338163 RPL7P18124 248 aaKnown RBP9.18□□□□□ -0.94
RBM39-202ENST00000338163 C3orf36Q3SXR2 165 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 SHISA9B4DS77 424 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 RNF182Q8N6D2 247 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 PIFOQ8TCI5 191 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 IGHV3OR16-13A0A075B7E8 117 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 IGHV3-74A0A0B4J1X5 117 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 MFAP4P55083 255 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 RNASE6Q93091 150 aaKnown RBP9.18□□□□□ -0.94
RBM39-202ENST00000338163 SPATA25Q9BR10 227 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 RAB1BQ9H0U4 201 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 SMPXQ9UHP9 88 aa9.18□□□□□ -0.94
RBM39-202ENST00000338163 GRNP28799 593 aaKnown RBP9.17□□□□□ -0.94
RBM39-202ENST00000338163 RRN3P1Q2M238 152 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 PSMG4Q5JS54 123 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 IL17RELQ6ZVW7 336 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 DYNAPQ8N1N2 210 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
RBM39-202ENST00000338163 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
RBM39-202ENST00000338163 ARHGAP32A7KAX9 2087 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 Q8N8P6 123 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 C21orf62Q9NYP8 219 aa9.17□□□□□ -0.94
RBM39-202ENST00000338163 HELZ2Q9BYK8 2649 aaKnown RBP9.16□□□□□ -0.94
RBM39-202ENST00000338163 TRAV26-1A0A087WT03 109 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 OR11H12B2RN74 326 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 LAGE3Q14657 143 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 OR11H2Q8NH07 326 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 DOPEY1Q5JWR5 2465 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 NBR2O15453 112 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms