RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RNF24Q9Y225 148 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 ITPR2Q14571 2701 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 NOTCH2Q04721 2471 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 OR4C46A6NHA9 309 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 M0R143 59 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 NPYP01303 97 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.33
SNCA-201ENST00000336904 MRPL51Q4U2R6 128 aaKnown RBP6.77□□□□□ -1.33
SNCA-201ENST00000336904 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 ZNF738Q8NE65 137 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 OR4B1Q8NGF8 309 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 OR10AG1Q8NH19 301 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 ZNF48Q96MX3 618 aaPredicted RBP6.77□□□□□ -1.33
SNCA-201ENST00000336904 SPOCK3Q9BQ16 436 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 GFRA4Q9GZZ7 299 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 UFC1Q9Y3C8 167 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 AKAP9Q99996 3911 aa6.77□□□□□ -1.33
SNCA-201ENST00000336904 CTRLP40313 264 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 OR4X2Q8NGF9 303 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 IGKV3D-20A0A0C4DH25 116 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 SCGB2A1O75556 95 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 TMEM70Q9BUB7 260 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 CKS2P33552 79 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 SIGLEC8Q9NYZ4 499 aa6.76□□□□□ -1.33
SNCA-201ENST00000336904 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 H3BVH4 76 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 RAB4AP20338 218 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
SNCA-201ENST00000336904 HIST1H1AQ02539 215 aaPredicted RBP6.75□□□□□ -1.33
SNCA-201ENST00000336904 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 TRBV7-1A0A0A6YYK4 115 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 SAPCD1Q5SSQ6 148 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 TMEM78Q5T7P6 136 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 GPHB5Q86YW7 130 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 C2orf88Q9BSF0 95 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 NDFIP1Q9BT67 221 aa6.75□□□□□ -1.33
SNCA-201ENST00000336904 BEX4Q9NWD9 120 aaPredicted RBP6.75□□□□□ -1.33
SNCA-201ENST00000336904 JMJD1CQ15652 2540 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 TCAPO15273 167 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 ZNF25P17030 456 aaPredicted RBP6.74□□□□□ -1.33
SNCA-201ENST00000336904 S100A7AQ86SG5 101 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 ZMAT5Q9UDW3 170 aaKnown RBP6.74□□□□□ -1.33
SNCA-201ENST00000336904 HELZ2Q9BYK8 2649 aaKnown RBP6.74□□□□□ -1.33
SNCA-201ENST00000336904 FABP5P3A8MUU1 101 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 NUTF2P61970 127 aaKnown RBP6.74□□□□□ -1.33
SNCA-201ENST00000336904 DEFB136Q30KP8 78 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 FAM104BQ5XKR9 115 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 STPG4Q8N801 248 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 A0A096LNJ9 63 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 A6NDX4 124 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 M0R381 172 aa6.74□□□□□ -1.33
SNCA-201ENST00000336904 B4DSR2 109 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 C18orf65Q6ZTR6 163 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 RHPN1-AS1Q9BWJ2 59 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 HECTD1Q9ULT8 2610 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
SNCA-201ENST00000336904 OR5AL1P0C617 328 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 RNASE4P34096 147 aaKnown RBP6.73□□□□□ -1.33
SNCA-201ENST00000336904 RAB9AP51151 201 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 C19orf54Q5BKX5 351 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 ORMDL3Q8N138 153 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
SNCA-201ENST00000336904 TRAV9-2A0A087WT02 112 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 IGHG2P01859 326 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 BMI1P35226 326 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 GNRH2O43555 120 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 IGLC6P0CF74 106 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 COX6B1P14854 86 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 LURAP1LQ8IV03 231 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 ZNF843Q8N446 348 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 NPFFR1Q9GZQ6 430 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 UQCR10Q9UDW1 63 aa6.72□□□□□ -1.33
SNCA-201ENST00000336904 TSPOP30536 169 aa6.71□□□□□ -1.33
SNCA-201ENST00000336904 CACNG7P62955 275 aa6.71□□□□□ -1.33
SNCA-201ENST00000336904 CHCHD1Q96BP2 118 aaKnown RBP6.71□□□□□ -1.33
SNCA-201ENST00000336904 RNF185Q96GF1 192 aa6.71□□□□□ -1.33
SNCA-201ENST00000336904 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 SPANXN1Q5VSR9 72 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 A0A087X0K7 114 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 FAM223BA6NKX1 122 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 NPSP0C0P6 89 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 KHDC1LQ5JSQ8 128 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 FAM223AQ8IWN6 122 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 TTTY13Q9BZ97 58 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 LAMTOR2Q9Y2Q5 125 aa6.71□□□□□ -1.34
SNCA-201ENST00000336904 SYNJ2BPP57105 145 aa6.7□□□□□ -1.34
SNCA-201ENST00000336904 CR1P17927 2039 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms