RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 LINC01548A6NM66 108 aa13.45□□□□□ -0.26
PTP4A3-201ENST00000329397 CD5LO43866 347 aa13.45□□□□□ -0.26
PTP4A3-201ENST00000329397 C15orf32Q32M92 178 aa13.45□□□□□ -0.26
PTP4A3-201ENST00000329397 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
PTP4A3-201ENST00000329397 K7ENP7 123 aa13.45□□□□□ -0.26
PTP4A3-201ENST00000329397 G3V318 75 aa13.44□□□□□ -0.26
PTP4A3-201ENST00000329397 PAX8Q06710 450 aa13.44□□□□□ -0.26
PTP4A3-201ENST00000329397 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
PTP4A3-201ENST00000329397 RNF185Q96GF1 192 aa13.44□□□□□ -0.26
PTP4A3-201ENST00000329397 JMJD8Q96S16 334 aa13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 A0A1W2PPR1 153 aa13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 SPG11Q96JI7 2443 aa13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 FBLL1A6NHQ2 334 aaKnown RBP13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 ADORA2A-AS1P86434 159 aa13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
PTP4A3-201ENST00000329397 M0R1W7 72 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 LGALS9CQ6DKI2 356 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 CLEC19AQ6UXS0 136 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 Q8N9W7 124 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 C11orf21Q9P2W6 132 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 TRAV26-2A0A0B4J265 109 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 ATP6V0E1O15342 81 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 SPRY2O43597 315 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 TRGV3P03979 118 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 LEPP41159 167 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 Q8N6K4 173 aa13.42□□□□□ -0.26
PTP4A3-201ENST00000329397 H3BUT2 72 aa13.41□□□□□ -0.26
PTP4A3-201ENST00000329397 LINC00527Q9UJ94 153 aa13.41□□□□□ -0.26
PTP4A3-201ENST00000329397 IGKV2D-26A0A0A0MRZ7 120 aa13.41□□□□□ -0.26
PTP4A3-201ENST00000329397 K7EMI3 77 aa13.41□□□□□ -0.26
PTP4A3-201ENST00000329397 SMAD7O15105 426 aaKnown RBP13.4□□□□□ -0.26
PTP4A3-201ENST00000329397 PEF1Q9UBV8 284 aaKnown RBP13.4□□□□□ -0.26
PTP4A3-201ENST00000329397 A1L4Q6 167 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 CCDC144NLQ6NUI1 221 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 IGKV3D-20A0A0C4DH25 116 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 FABP5P3A8MUU1 101 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 KIR3DS1Q14943 382 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 C11orf71Q6IPW1 123 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 MAP1LC3AQ9H492 121 aa13.39□□□□□ -0.27
PTP4A3-201ENST00000329397 BUB3O43684 328 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 TSPAN13O95857 204 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 PSMG3-AS1Q96PY0 264 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 ZFAND3Q9H8U3 227 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 GATA3P23771 443 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 UFC1Q9Y3C8 167 aa13.38□□□□□ -0.27
PTP4A3-201ENST00000329397 PRSS1P07477 247 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 ARL3P36405 182 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 AGPAT4-IT1Q9H0P7 198 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 GEMIN7Q9H840 131 aaKnown RBP13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 YAE1D1Q9NRH1 226 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 CLPSL1A2RUU4 121 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 GAGE10A6NGK3 116 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 DEFB1P60022 68 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 ADAMTSL5Q6ZMM2 481 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 DTX2Q86UW9 622 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.37□□□□□ -0.279e-7■■■□□ 16.3
PTP4A3-201ENST00000329397 AGRNO00468 2067 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 COX8CQ7Z4L0 72 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 TMEM219Q86XT9 240 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 SIGMAR1Q99720 223 aa13.37□□□□□ -0.27
PTP4A3-201ENST00000329397 ABCA2Q9BZC7 2435 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 SAA4P35542 130 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 NBL1P41271 181 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 SEC11AP67812 179 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 FBXL19-AS1Q494R0 122 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 CRYBG3Q68DQ2 2970 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 AP1S3Q96PC3 154 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 FOXC2Q99958 501 aa13.36□□□□□ -0.27
PTP4A3-201ENST00000329397 IGF1P05019 195 aa13.35□□□□□ -0.27
PTP4A3-201ENST00000329397 AJUBAQ96IF1 538 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 CELSR2Q9HCU4 2923 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 TRAV8-2A0A0B4J237 113 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 K7ERJ3 54 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 GCSHP23434 173 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 EBI3Q14213 229 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 SIRPDQ9H106 197 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 RAXQ9Y2V3 346 aa13.34□□□□□ -0.27
PTP4A3-201ENST00000329397 A0A0G2JLM5 398 aa13.33□□□□□ -0.27
PTP4A3-201ENST00000329397 HSD52Q0P140 79 aa13.33□□□□□ -0.27
PTP4A3-201ENST00000329397 C9orf118A6NHY6 69 aa13.33□□□□□ -0.28
PTP4A3-201ENST00000329397 SMIM20Q8N5G0 67 aa13.33□□□□□ -0.28
PTP4A3-201ENST00000329397 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.28
PTP4A3-201ENST00000329397 A6NDN8 102 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 SCGB2A1O75556 95 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 FXYD2P54710 66 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 UBTD1Q9HAC8 227 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 HHLA3Q9XRX5 114 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 FCER1GP30273 86 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 EFNA4P52798 201 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 PRR9Q5T870 116 aa13.32□□□□□ -0.28
PTP4A3-201ENST00000329397 C8orf86Q6ZUL3 223 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms