RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 METTL26Q96S19 204 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 TMEM200BQ69YZ2 307 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 SPTA1P02549 2419 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 TMEM131Q92545 1883 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 LGALS1P09382 135 aaKnown RBP8.57□□□□□ -1.04
GGA2-201ENST00000309859 Q6ZSR3 168 aa8.57□□□□□ -1.04
GGA2-201ENST00000309859 ZDBF2Q9HCK1 2354 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 TMEM167AQ8TBQ9 72 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 RANBP2P49792 3224 aaKnown RBP8.56□□□□□ -1.04
GGA2-201ENST00000309859 CDX4O14627 284 aaPredicted RBP8.56□□□□□ -1.04
GGA2-201ENST00000309859 FAM27E3Q08E93 113 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 CR1LQ2VPA4 569 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 C1orf159Q96HA4 380 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 HIGD1BQ9P298 99 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 CD7P09564 240 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
GGA2-201ENST00000309859 TDHQ8IZJ6 230 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 LINC00312Q9Y6C7 94 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 PPP1R17O96001 155 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 PRR25Q96S07 402 aa8.56□□□□□ -1.04
GGA2-201ENST00000309859 A4D1N5 150 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 TRIP6Q15654 476 aaKnown RBP8.55□□□□□ -1.04
GGA2-201ENST00000309859 RPL39LQ96EH5 51 aaKnown RBP8.55□□□□□ -1.04
GGA2-201ENST00000309859 TM2D2Q9BX73 214 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 GP9P14770 177 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 Q6ZQT7 251 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 SHANK2-AS3Q9BTD1 123 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 RAB1BQ9H0U4 201 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 LINC00527Q9UJ94 153 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 TIMM23O14925 209 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 PIMREGQ9BSJ6 248 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 ARRDC1-AS1Q9H2J1 176 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 SMRP1Q8NCR6 262 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
GGA2-201ENST00000309859 PCNX2A6NKB5 2137 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 C11orf53Q8IXP5 236 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 PTPRZ1P23471 2315 aaPredicted RBP8.54□□□□□ -1.04
GGA2-201ENST00000309859 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 CFC1P0CG37 223 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 SAP25Q8TEE9 199 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 CFHR4Q92496 578 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 GAFA1Q96PS6 74 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 ATG2AQ2TAZ0 1938 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 TRACP01848 142 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 Q8N1Y9 231 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 LOC107984640A0A0U1RRK4 108 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 SPRY4Q9C004 299 aa8.54□□□□□ -1.04
GGA2-201ENST00000309859 IGHV3OR16-10A0A075B7F0 116 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 CD28P10747 220 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 PVRIGQ6DKI7 326 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 LYPD2Q6UXB3 125 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 CIRBPQ14011 172 aaKnown RBP8.53□□□□□ -1.04
GGA2-201ENST00000309859 ZNF493Q6ZR52 646 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
GGA2-201ENST00000309859 TM4SF5O14894 197 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 PRSS22Q9GZN4 317 aa8.53□□□□□ -1.04
GGA2-201ENST00000309859 IGHV1-46P01743 117 aa8.52□□□□□ -1.04
GGA2-201ENST00000309859 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.04
GGA2-201ENST00000309859 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.52□□□□□ -1.043e-7■■■□□ 18.4
GGA2-201ENST00000309859 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 AGRNO00468 2067 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 SIGLEC9Q9Y336 463 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 CRLF1O75462 422 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 DAND5Q8N907 189 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 KRTAP27-1Q3LI81 207 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 AJUBAQ96IF1 538 aa8.52□□□□□ -1.05
GGA2-201ENST00000309859 J3QQQ9 107 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 MUSTN1Q8IVN3 82 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 TMEM105Q8N8V8 129 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 CNOT1A5YKK6 2376 aaKnown RBP8.51□□□□□ -1.05
GGA2-201ENST00000309859 IGKV3D-7A0A0C4DH55 119 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 LINC01620Q4KN68 170 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 CFAP54Q96N23 3096 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 NBASA2RRP1 2371 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 CD3EP07766 207 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 KLK5Q9Y337 293 aaPredicted RBP8.51□□□□□ -1.05
GGA2-201ENST00000309859 NACAE9PAV3 2078 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 DUSP14O95147 198 aaKnown RBP8.51□□□□□ -1.05
GGA2-201ENST00000309859 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 IGHV3-11P01762 117 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 TEX36Q5VZQ5 186 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 C17orf82Q86X59 251 aaPredicted RBP8.51□□□□□ -1.05
GGA2-201ENST00000309859 DYNAPQ8N1N2 210 aa8.51□□□□□ -1.05
GGA2-201ENST00000309859 IGHV3OR16-12A0A075B7B8 117 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms