RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 SIVA1O15304 175 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 RBP4P02753 201 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 TMEM200BQ69YZ2 307 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 PRO0461Q9UI25 63 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 CD3EP07766 207 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 SMCPP49901 116 aaPredicted RBP12.72□□□□□ -0.37
CCDC8-201ENST00000307522 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 ODF1Q14990 250 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 Q6ZUT4 128 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 LINC00312Q9Y6C7 94 aa12.72□□□□□ -0.37
CCDC8-201ENST00000307522 A0A1W2PPI3 338 aa12.71□□□□□ -0.37
CCDC8-201ENST00000307522 SMIM20Q8N5G0 67 aa12.71□□□□□ -0.37
CCDC8-201ENST00000307522 PGPEP1Q9NXJ5 209 aa12.71□□□□□ -0.37
CCDC8-201ENST00000307522 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
CCDC8-201ENST00000307522 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
CCDC8-201ENST00000307522 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.38
CCDC8-201ENST00000307522 IGKCP01834 107 aa12.71□□□□□ -0.38
CCDC8-201ENST00000307522 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.38
CCDC8-201ENST00000307522 ADORA2A-AS1P86434 159 aa12.7□□□□□ -0.38
CCDC8-201ENST00000307522 OR10X1Q8NGY0 326 aa12.7□□□□□ -0.38
CCDC8-201ENST00000307522 TMEM133Q9H2Q1 129 aa12.7□□□□□ -0.38
CCDC8-201ENST00000307522 TMEM178BH3BS89 294 aa12.69□□□□□ -0.38
CCDC8-201ENST00000307522 CNTFRP26992 372 aa12.69□□□□□ -0.38
CCDC8-201ENST00000307522 TMEM158Q8WZ71 300 aa12.69□□□□□ -0.38
CCDC8-201ENST00000307522 DPF1Q92782 380 aa12.69□□□□□ -0.38
CCDC8-201ENST00000307522 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
CCDC8-201ENST00000307522 NDUFB3O43676 98 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 EFNA4P52798 201 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 RRN3P1Q2M238 152 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 DOPEY2Q9Y3R5 2298 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 IGKV2-40A0A087WW87 121 aaPredicted RBP12.68□□□□□ -0.38
CCDC8-201ENST00000307522 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 IGKV2D-40P01614 121 aaPredicted RBP12.68□□□□□ -0.38
CCDC8-201ENST00000307522 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
CCDC8-201ENST00000307522 SONP18583 2426 aaKnown RBP12.68□□□□□ -0.38
CCDC8-201ENST00000307522 HIGD1AQ9Y241 93 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 CT45A10P0DMU9 189 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 TSPAN13O95857 204 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 PRTN3P24158 256 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 TTC9CQ8N5M4 171 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 C1QTNF4Q9BXJ3 329 aa12.67□□□□□ -0.38
CCDC8-201ENST00000307522 A0A1W2PPR1 153 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 LINC01549A6NIU2 74 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 HLA-DRB4P13762 266 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 KLF17Q5JT82 389 aaPredicted RBP12.66□□□□□ -0.38
CCDC8-201ENST00000307522 SLC25A39Q9BZJ4 359 aaPredicted RBP12.66□□□□□ -0.38
CCDC8-201ENST00000307522 HLA-DRB4X5D2U9 266 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 SPRY2O43597 315 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 KLRB1Q12918 225 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 ERG28Q9UKR5 140 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
CCDC8-201ENST00000307522 SH2D1AO60880 128 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 CGB3P0DN86 165 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 CGB7P0DN87 165 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 NUP37Q8NFH4 326 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 SCGB2A1O75556 95 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 PAX8Q06710 450 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 CARD19Q96LW7 228 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
CCDC8-201ENST00000307522 GNLYP22749 145 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 GATA4P43694 442 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 KLRD1Q13241 179 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 C5orf64Q2M2E5 130 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
CCDC8-201ENST00000307522 NGBQ9NPG2 151 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 IGHV3-35A0A0C4DH35 117 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 CCDC179H3BU77 68 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 DPM2O94777 84 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 PRB1P04280 392 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC8-201ENST00000307522 ORM1P02763 201 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 ZNF502Q8TBZ5 544 aa12.64□□□□□ -0.39
CCDC8-201ENST00000307522 HLA-DMBP28068 263 aa12.63□□□□□ -0.39
CCDC8-201ENST00000307522 LOXP28300 417 aaPredicted RBP12.63□□□□□ -0.39
CCDC8-201ENST00000307522 UBTD1Q9HAC8 227 aa12.63□□□□□ -0.39
CCDC8-201ENST00000307522 VSTM5A8MXK1 200 aa12.63□□□□□ -0.39
CCDC8-201ENST00000307522 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
CCDC8-201ENST00000307522 THAP8Q8NA92 274 aa12.63□□□□□ -0.39
CCDC8-201ENST00000307522 C8orf46Q8TAG6 207 aa12.63□□□□□ -0.39
CCDC8-201ENST00000307522 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
CCDC8-201ENST00000307522 EMP1P54849 157 aa12.62□□□□□ -0.39
CCDC8-201ENST00000307522 AJUBAQ96IF1 538 aa12.62□□□□□ -0.39
CCDC8-201ENST00000307522 RPEQ96AT9 228 aa12.62□□□□□ -0.39
CCDC8-201ENST00000307522 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
CCDC8-201ENST00000307522 H7C2G1 150 aa12.62□□□□□ -0.39
CCDC8-201ENST00000307522 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
CCDC8-201ENST00000307522 C19orf84I3L1E1 186 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 IL4P05112 153 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 Q6AWC8 147 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 HIGD1BQ9P298 99 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 NAV2Q8IVL1 2488 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
CCDC8-201ENST00000307522 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
CCDC8-201ENST00000307522 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 TRBV7-9A0A0J9YWB2 115 aa12.6□□□□□ -0.39
CCDC8-201ENST00000307522 GAGE5Q13069 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms