RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 IGHV4-31P0DP07 118 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 BMI1P35226 326 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 FOXA3P55318 350 aaPredicted RBP10.45□□□□□ -0.74
VMP1-201ENST00000262291 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 C12orf54Q6X4T0 127 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 IL17RELQ6ZVW7 336 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 GTSF1Q8WW33 167 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 RPP21Q9H633 154 aaKnown RBP10.45□□□□□ -0.74
VMP1-201ENST00000262291 HELZ2Q9BYK8 2649 aaKnown RBP10.45□□□□□ -0.74
VMP1-201ENST00000262291 TMSB15BA0A087X1C1 80 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 ARL3P36405 182 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 JMJD8Q96S16 334 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 VGLL1Q99990 258 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
VMP1-201ENST00000262291 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 TRBV7-1A0A0A6YYK4 115 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 TMEM238LA0A1B0GVL6 79 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 PRAC2D3DTV9 90 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 CD5LO43866 347 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 IGHG2P01859 326 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 ERCC8Q13216 396 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 PSG3Q16557 428 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 BUB3O43684 328 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 IGHG4P01861 327 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 CRIP1P50238 77 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 SMAGPQ0VAQ4 97 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 TPPP3Q9BW30 176 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 ST20Q9HBF5 79 aa10.44□□□□□ -0.74
VMP1-201ENST00000262291 IGKV3-7A0A075B6H7 116 aa10.43□□□□□ -0.74
VMP1-201ENST00000262291 C19orf71A6NCJ1 209 aa10.43□□□□□ -0.74
VMP1-201ENST00000262291 CHEK1O14757 476 aa10.43□□□□□ -0.74
VMP1-201ENST00000262291 PPIFP30405 207 aaKnown RBP10.43□□□□□ -0.74
VMP1-201ENST00000262291 H3BUT2 72 aa10.43□□□□□ -0.74
VMP1-201ENST00000262291 SMAD7O15105 426 aaKnown RBP10.43□□□□□ -0.74
VMP1-201ENST00000262291 URB1-AS1Q96HZ7 61 aa10.43□□□□□ -0.74
VMP1-201ENST00000262291 BEX4Q9NWD9 120 aaPredicted RBP10.43□□□□□ -0.74
VMP1-201ENST00000262291 IGF1P05019 195 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 EDN2P20800 178 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 CSN1S1P47710 185 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 RAB37Q96AX2 223 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 SYS1-DBNDD2H3BUS1 97 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 K7EQM0 130 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 TMEM75Q8N9X5 138 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 METTL26Q96S19 204 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 PRSS22Q9GZN4 317 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 ACANP16112 2415 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 GATA3P23771 443 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 ZNF138P52744 262 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 HIST2H2BDQ6DRA6 164 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 LYPD1Q8N2G4 141 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 OR4X2Q8NGF9 303 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
VMP1-201ENST00000262291 DEFB1P60022 68 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 FLNAP21333 2647 aaKnown RBP10.41□□□□□ -0.74
VMP1-201ENST00000262291 FAM223BA6NKX1 122 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 AZU1P20160 251 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 RPL24P83731 157 aaKnown RBP10.41□□□□□ -0.74
VMP1-201ENST00000262291 LOXL1Q08397 574 aaPredicted RBP10.41□□□□□ -0.74
VMP1-201ENST00000262291 PDE6HQ13956 83 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 KLK9Q2XQG4 91 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 UFSP1Q6NVU6 142 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 FAM223AQ8IWN6 122 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 WFDC11Q8NEX6 87 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 KLK9Q9UKQ9 250 aa10.41□□□□□ -0.74
VMP1-201ENST00000262291 ITPR2Q14571 2701 aa10.4□□□□□ -0.74
VMP1-201ENST00000262291 ZNF492Q9P255 531 aa10.4□□□□□ -0.74
VMP1-201ENST00000262291 IGHV1-24A0A0C4DH33 117 aa10.4□□□□□ -0.75
VMP1-201ENST00000262291 FBLL1A6NHQ2 334 aaKnown RBP10.4□□□□□ -0.75
VMP1-201ENST00000262291 A8MWL6 223 aa10.4□□□□□ -0.75
VMP1-201ENST00000262291 LEPROTL1O95214 131 aa10.4□□□□□ -0.75
VMP1-201ENST00000262291 CRIP2P52943 208 aaPredicted RBP10.4□□□□□ -0.75
VMP1-201ENST00000262291 KRTAP1-3Q8IUG1 177 aa10.4□□□□□ -0.75
VMP1-201ENST00000262291 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 SRD5A1P18405 259 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 RAB9AP51151 201 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 ZNF80P51504 273 aaPredicted RBP10.39□□□□□ -0.75
VMP1-201ENST00000262291 HIST1H1AQ02539 215 aaPredicted RBP10.39□□□□□ -0.75
VMP1-201ENST00000262291 GTF2H5Q6ZYL4 71 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 HOXA3O43365 443 aaPredicted RBP10.39□□□□□ -0.75
VMP1-201ENST00000262291 RPL11P62913 178 aaKnown RBP10.39□□□□□ -0.75
VMP1-201ENST00000262291 COX19Q49B96 90 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
VMP1-201ENST00000262291 KMT2BQ9UMN6 2715 aaPredicted RBP10.39□□□□□ -0.75
VMP1-201ENST00000262291 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 TRAV8-2A0A0B4J237 113 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 SH2D1AO60880 128 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 PRSS57Q6UWY2 283 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
VMP1-201ENST00000262291 CT45A10P0DMU9 189 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 J3KRW8 73 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 J3QLI3 93 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 ARMS2P0C7Q2 107 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 PLA2G2AP14555 144 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 TMEM97Q5BJF2 176 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 Q6ZQT7 251 aa10.37□□□□□ -0.75
VMP1-201ENST00000262291 PRR25Q96S07 402 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms