RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.86
SPG11-201ENST00000261866 PFN1P07737 140 aaKnown RBP9.65□□□□□ -0.87
SPG11-201ENST00000261866 XCL1P47992 114 aa9.65□□□□□ -0.87
SPG11-201ENST00000261866 BLCAPP62952 87 aa9.65□□□□□ -0.87
SPG11-201ENST00000261866 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.87
SPG11-201ENST00000261866 TANC1Q9C0D5 1861 aa9.65□□□□□ -0.87
SPG11-201ENST00000261866 CDKN1BP46527 198 aa9.65□□□□□ -0.87
SPG11-201ENST00000261866 TSSC4Q9Y5U2 329 aaPredicted RBP9.65□□□□□ -0.87
SPG11-201ENST00000261866 PKDREJQ9NTG1 2253 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 C15orf65H3BRN8 121 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 SPINK8P0C7L1 97 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 RSPO1Q2MKA7 263 aaPredicted RBP9.64□□□□□ -0.87
SPG11-201ENST00000261866 GNRH2O43555 120 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 SLX1AQ9BQ83 275 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 NDUFA4O00483 81 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 AMBPP02760 352 aa9.64□□□□□ -0.87
SPG11-201ENST00000261866 TRBV19A0A075B6N1 114 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 PLEKHB2Q96CS7 222 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 KIF26AQ9ULI4 1882 aaPredicted RBP9.63□□□□□ -0.87
SPG11-201ENST00000261866 IGHV7-4-1A0A0J9YVY3 117 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 HIST2H2BDQ6DRA6 164 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 LYPD1Q8N2G4 141 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 LMO1P25800 156 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 NOTCH4Q99466 2003 aa9.63□□□□□ -0.87
SPG11-201ENST00000261866 ZC2HC1BQ5TFG8 222 aa9.62□□□□□ -0.87
SPG11-201ENST00000261866 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
SPG11-201ENST00000261866 LY6G5BQ8NDX9 201 aa9.62□□□□□ -0.87
SPG11-201ENST00000261866 IGHV2-70P01814 119 aa9.62□□□□□ -0.87
SPG11-201ENST00000261866 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
SPG11-201ENST00000261866 I3L3M4 83 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 CRYGCP07315 174 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 ZFP36P26651 326 aaKnown RBP9.61□□□□□ -0.87
SPG11-201ENST00000261866 ADAMTS9Q9P2N4 1935 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 C3orf79P0CE67 100 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
SPG11-201ENST00000261866 HIST3H2BBQ8N257 126 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 SRSF8Q9BRL6 282 aaKnown RBP9.61□□□□□ -0.87
SPG11-201ENST00000261866 CHAC1Q9BUX1 264 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 H3BRN7 92 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 IGHV3-30P01768 117 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 IGHV3-33P01772 117 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 IGHV3-30-3P0DP02 117 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 IGHV3-30-5P0DP03 117 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 WFDC11Q8NEX6 87 aa9.61□□□□□ -0.87
SPG11-201ENST00000261866 CENPVL3A0A0U1RRI6 287 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 CRLF1O75462 422 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 FOXE3Q13461 319 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 KIR3DS1Q14943 382 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 TMEM243Q9BU79 118 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 HSD52Q0P140 79 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 PIFOQ8TCI5 191 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 SMIM2Q9BVW6 85 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.6□□□□□ -0.87
SPG11-201ENST00000261866 Q6ZS49 121 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 SDHAF1A6NFY7 115 aa9.6□□□□□ -0.87
SPG11-201ENST00000261866 COLCA2A8K830 154 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 K7EMI3 77 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 SEC11AP67812 179 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 ZC2HC1AQ96GY0 325 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 U3KQE9 123 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 LRCOL1A6NCL2 159 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 DSCR8Q96T75 97 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 SYS1-DBNDD2H3BUS1 97 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 GP9P14770 177 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
SPG11-201ENST00000261866 LOC105371267A0A1B0GV96 52 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
SPG11-201ENST00000261866 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
SPG11-201ENST00000261866 MRPL27Q9P0M9 148 aaKnown RBP9.59□□□□□ -0.87
SPG11-201ENST00000261866 ADAMTSL5Q6ZMM2 481 aa9.59□□□□□ -0.88
SPG11-201ENST00000261866 ARHGAP21Q5T5U3 1957 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 TRAV1-1A0A0B4J248 108 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 ZNF726P1Q15940 193 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 ANAPC1Q9H1A4 1944 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
SPG11-201ENST00000261866 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
SPG11-201ENST00000261866 C2orf66Q6UXQ4 117 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 CITED1Q99966 193 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 COL4A3Q01955 1670 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 PDE6HQ13956 83 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 NBASA2RRP1 2371 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 WIPF3A6NGB9 483 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 DYNAPQ8N1N2 210 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 PRR25Q96S07 402 aa9.58□□□□□ -0.88
SPG11-201ENST00000261866 PLXNA2O75051 1894 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 TANC2Q9HCD6 1990 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 C11orf53Q8IXP5 236 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 C9JQL5 133 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 C1orf147Q96MC9 270 aaPredicted RBP9.57□□□□□ -0.88
SPG11-201ENST00000261866 ELANEP08246 267 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 PCNX1Q96RV3 2341 aa9.57□□□□□ -0.88
SPG11-201ENST00000261866 MAJINQ3KP22 176 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms