RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 ODF1Q14990 250 aa11.44□□□□□ -0.58
PRDM4-201ENST00000228437 KLHL30-AS1Q8NEE0 82 aa11.44□□□□□ -0.58
PRDM4-201ENST00000228437 RAB1BQ9H0U4 201 aa11.44□□□□□ -0.58
PRDM4-201ENST00000228437 IGF2RP11717 2491 aa11.44□□□□□ -0.58
PRDM4-201ENST00000228437 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 MYCNOSP40205 109 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 RRN3P1Q2M238 152 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 ZNF256Q9Y2P7 627 aaPredicted RBP11.43□□□□□ -0.58
PRDM4-201ENST00000228437 TRGV3P03979 118 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 PRSS33Q8NF86 280 aa11.43□□□□□ -0.58
PRDM4-201ENST00000228437 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
PRDM4-201ENST00000228437 NBR2O15453 112 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 NPC2P61916 151 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 CTSZQ9UBR2 303 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 LOXP28300 417 aaPredicted RBP11.42□□□□□ -0.58
PRDM4-201ENST00000228437 ZNF80P51504 273 aaPredicted RBP11.42□□□□□ -0.58
PRDM4-201ENST00000228437 ADIPOQQ15848 244 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 C22orf34Q6ZV56 151 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 C9JAW5 83 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 IGLV2-23P01705 113 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 MT-ATP8P03928 68 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 LGALS3P17931 250 aaKnown RBP11.42□□□□□ -0.58
PRDM4-201ENST00000228437 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 PRADC1Q9BSG0 188 aa11.42□□□□□ -0.58
PRDM4-201ENST00000228437 TLN1Q9Y490 2541 aaKnown RBP11.41□□□□□ -0.58
PRDM4-201ENST00000228437 PRSS29PA6NIE9 313 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 LINC01560Q8TB33 94 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 A0A096LNJ9 63 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 H3BRN7 92 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 SMPXQ9UHP9 88 aa11.41□□□□□ -0.58
PRDM4-201ENST00000228437 PTPRBP23467 1997 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 DPM3Q9P2X0 92 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 H7C1H1 209 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 GAGE2BQ13066 116 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 GAGE2EQ4V326 116 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 C3orf56Q8N813 242 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.58
PRDM4-201ENST00000228437 GAGE2DQ9UEU5 116 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 CEP192Q8TEP8 1941 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 IGLV3-9A0A075B6K5 115 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 BUB1B-PAK6H3BSN5 160 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 FOXC1Q12948 553 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 TMEM155Q4W5P6 130 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 DYNAPQ8N1N2 210 aa11.4□□□□□ -0.58
PRDM4-201ENST00000228437 OTOGLQ3ZCN5 2332 aa11.4□□□□□ -0.59
PRDM4-201ENST00000228437 NOTCH2Q04721 2471 aa11.4□□□□□ -0.59
PRDM4-201ENST00000228437 CD3EP07766 207 aa11.4□□□□□ -0.59
PRDM4-201ENST00000228437 C8orf86Q6ZUL3 223 aa11.4□□□□□ -0.59
PRDM4-201ENST00000228437 DPF1Q92782 380 aa11.4□□□□□ -0.59
PRDM4-201ENST00000228437 PRAC2D3DTV9 90 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 CR1LQ2VPA4 569 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 SRD5A1P18405 259 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 MYMXA0A1B0GTQ4 84 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 ZFP2Q6ZN57 461 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 CFHR4Q92496 578 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 RNF183Q96D59 192 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 TMEM14CQ9P0S9 112 aa11.39□□□□□ -0.59
PRDM4-201ENST00000228437 IGHG3P01860 377 aa11.38□□□□□ -0.59
PRDM4-201ENST00000228437 Q8N8P6 123 aa11.38□□□□□ -0.59
PRDM4-201ENST00000228437 ADAMTS20P59510 1910 aa11.38□□□□□ -0.59
PRDM4-201ENST00000228437 CHD8Q9HCK8 2581 aa11.38□□□□□ -0.59
PRDM4-201ENST00000228437 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
PRDM4-201ENST00000228437 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
PRDM4-201ENST00000228437 ZNF48Q96MX3 618 aaPredicted RBP11.38□□□□□ -0.59
PRDM4-201ENST00000228437 PLNP26678 52 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 GATA4P43694 442 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 METTL26Q96S19 204 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 UBTD1Q9HAC8 227 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 COL4A2P08572 1712 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 K7EIM0 57 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 CD59P13987 128 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 DKK4Q9UBT3 224 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 FOXI1Q12951 378 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 FAM208BQ5VWN6 2430 aa11.37□□□□□ -0.59
PRDM4-201ENST00000228437 I3L2K1 104 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 COL6A3P12111 3177 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 A0A0U1RRA0 63 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 C2orf66Q6UXQ4 117 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 F8VRH5 84 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 DEFB1P60022 68 aa11.36□□□□□ -0.59
PRDM4-201ENST00000228437 WNK1Q9H4A3 2382 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 E9PLD3 99 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 K7EM74 188 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 A0A087WX48 190 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 IGHV3-11P01762 117 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 CRYGCP07315 174 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 PSMG4Q5JS54 123 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 OR10J6PQ8NGY7 276 aa11.35□□□□□ -0.59
PRDM4-201ENST00000228437 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
PRDM4-201ENST00000228437 RPL39LQ96EH5 51 aaKnown RBP11.34□□□□□ -0.59
PRDM4-201ENST00000228437 TRAV12-3A0A0B4J271 114 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms