RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 IQCJQ1A5X6 159 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 ATP5L2Q7Z4Y8 100 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 TMEM75Q8N9X5 138 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 DAZAP1Q96EP5 407 aaKnown RBP13.61□□□□□ -0.23
CBX1-201ENST00000225603 PRO1933Q9H354 126 aa13.61□□□□□ -0.23
CBX1-201ENST00000225603 FBN1P35555 2871 aaKnown RBP13.61□□□□□ -0.23
CBX1-201ENST00000225603 A8MWL6 223 aa13.6□□□□□ -0.23
CBX1-201ENST00000225603 CSN3P07498 182 aa13.6□□□□□ -0.23
CBX1-201ENST00000225603 RNF182Q8N6D2 247 aa13.6□□□□□ -0.23
CBX1-201ENST00000225603 A0A1B0GXF2 115 aa13.6□□□□□ -0.23
CBX1-201ENST00000225603 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
CBX1-201ENST00000225603 NPIPB6E9PJ23 425 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 ZNF253O75346 499 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 PSG9Q00887 426 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 CITED1Q99966 193 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 K7EQM0 130 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 Q6ZWC4 215 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 GTSF1Q8WW33 167 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 GFRA4Q9GZZ7 299 aa13.59□□□□□ -0.23
CBX1-201ENST00000225603 ZNF705FA8MVS1 300 aaPredicted RBP13.58□□□□□ -0.24
CBX1-201ENST00000225603 DIRC3C9JPN6 131 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 SOCS3O14543 225 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 SCGB1D1O95968 90 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 PSG3Q16557 428 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 ZNF664Q8N3J9 261 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 SAMD10Q9BYL1 202 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 AAMDCQ9H7C9 122 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 OVOL1O14753 267 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 BMI1P35226 326 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 RCHY1Q96PM5 261 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 NRN1Q9NPD7 142 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 PSG8Q9UQ74 426 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 ZFP30Q9Y2G7 519 aa13.58□□□□□ -0.24
CBX1-201ENST00000225603 DDTP30046 118 aa13.57□□□□□ -0.24
CBX1-201ENST00000225603 CAMPP49913 170 aa13.57□□□□□ -0.24
CBX1-201ENST00000225603 KCNS1Q96KK3 526 aa13.57□□□□□ -0.24
CBX1-201ENST00000225603 C20orf173Q96LM9 149 aa13.57□□□□□ -0.24
CBX1-201ENST00000225603 NAGKQ9UJ70 344 aa13.57□□□□□ -0.24
CBX1-201ENST00000225603 HBBP68871 147 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 ZC2HC1AQ96GY0 325 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 C16orf92Q96LL3 132 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 SLC50A1Q9BRV3 221 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 FAM231BA6NCW3 169 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 M0QZ24 198 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 RBPMS2Q6ZRY4 209 aaKnown RBP13.56□□□□□ -0.24
CBX1-201ENST00000225603 WFDC3Q8IUB2 231 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 PGLYRP4Q96LB8 373 aa13.56□□□□□ -0.24
CBX1-201ENST00000225603 SSBP4Q9BWG4 385 aaPredicted RBP13.56□□□□□ -0.24
CBX1-201ENST00000225603 PRAC2D3DTV9 90 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 GPX1P07203 203 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 DEFA6Q01524 100 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 MS4A6AQ9H2W1 248 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 TFPI2P48307 235 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 OR2D3Q8NGH3 330 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 C18orf32Q8TCD1 76 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 DCANP1Q8TF63 244 aa13.55□□□□□ -0.24
CBX1-201ENST00000225603 CD33P20138 364 aa13.54□□□□□ -0.24
CBX1-201ENST00000225603 ASCL2Q99929 193 aa13.54□□□□□ -0.24
CBX1-201ENST00000225603 IGKV2-40A0A087WW87 121 aaPredicted RBP13.54□□□□□ -0.24
CBX1-201ENST00000225603 IGKV2D-40P01614 121 aaPredicted RBP13.54□□□□□ -0.24
CBX1-201ENST00000225603 CSN1S1P47710 185 aa13.54□□□□□ -0.24
CBX1-201ENST00000225603 DEFB114Q30KQ6 69 aa13.54□□□□□ -0.24
CBX1-201ENST00000225603 SPATA3Q8NHX4 192 aa13.54□□□□□ -0.24
CBX1-201ENST00000225603 SERTM2A0A1B0GWG4 89 aa13.53□□□□□ -0.24
CBX1-201ENST00000225603 DYNLRB2Q8TF09 96 aa13.53□□□□□ -0.24
CBX1-201ENST00000225603 ALKBH7Q9BT30 221 aaPredicted RBP13.53□□□□□ -0.24
CBX1-201ENST00000225603 PF4P02776 101 aa13.52□□□□□ -0.24
CBX1-201ENST00000225603 AMTP48728 403 aa13.52□□□□□ -0.24
CBX1-201ENST00000225603 DEFB1P60022 68 aa13.52□□□□□ -0.24
CBX1-201ENST00000225603 TMEM61Q8N0U2 210 aa13.52□□□□□ -0.24
CBX1-201ENST00000225603 LINC00482Q8N8I6 264 aa13.52□□□□□ -0.24
CBX1-201ENST00000225603 ZNF324O75467 553 aaPredicted RBP13.52□□□□□ -0.25
CBX1-201ENST00000225603 PMCHP20382 165 aa13.52□□□□□ -0.25
CBX1-201ENST00000225603 CD300EQ496F6 205 aaPredicted RBP13.52□□□□□ -0.25
CBX1-201ENST00000225603 C14orf144Q96I85 54 aa13.52□□□□□ -0.25
CBX1-201ENST00000225603 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
CBX1-201ENST00000225603 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
CBX1-201ENST00000225603 CRIP1P50238 77 aa13.51□□□□□ -0.25
CBX1-201ENST00000225603 ARL6IP6Q8N6S5 226 aa13.51□□□□□ -0.25
CBX1-201ENST00000225603 VGLL1Q99990 258 aa13.51□□□□□ -0.25
CBX1-201ENST00000225603 K7EQG2 157 aa13.51□□□□□ -0.25
CBX1-201ENST00000225603 FOXA3P55318 350 aaPredicted RBP13.51□□□□□ -0.25
CBX1-201ENST00000225603 VWFP04275 2813 aa13.51□□□□□ -0.25
CBX1-201ENST00000225603 C8orf49Q96NF6 230 aa13.5□□□□□ -0.25
CBX1-201ENST00000225603 SIGLEC8Q9NYZ4 499 aa13.5□□□□□ -0.25
CBX1-201ENST00000225603 ERCC8Q13216 396 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 PRR31Q5SQ13 230 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 SORL1Q92673 2214 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 SAP30O75446 220 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 CT45A10P0DMU9 189 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 MRPL53Q96EL3 112 aaKnown RBP13.49□□□□□ -0.25
CBX1-201ENST00000225603 ZNF747Q9BV97 191 aa13.49□□□□□ -0.25
CBX1-201ENST00000225603 ZNF688P0C7X2 276 aa13.48□□□□□ -0.25
CBX1-201ENST00000225603 TEX43Q6ZNM6 134 aa13.48□□□□□ -0.25
CBX1-201ENST00000225603 CLEC5AQ9NY25 188 aa13.48□□□□□ -0.25
CBX1-201ENST00000225603 KIR2DL5BA0A0G2JN68 375 aa13.47□□□□□ -0.25
CBX1-201ENST00000225603 KIR2DL5BA0A0G2JPC4 375 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms