RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Fbxw4Q9JMJ2 410 aa13.23□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Polr2aP08775 1970 aaKnown RBP13.23□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Trav4-2A0A075B638 110 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Gm21900J3QP38 180 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Gm10665K7N6B7 321 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Ca11O70354 328 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Psg27Q497W2 474 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Ubald2Q8BQH4 164 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Ovol2Q8CIV7 274 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr968Q8VFN4 314 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Tmed6Q9CQG0 239 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Tmem171Q4KL18 322 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Tmem140Q8BGY5 185 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Scgb1b19F6WYW0 93 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Mst1P26928 716 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Psg17Q62056 475 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Ammecr1lQ8JZZ6 310 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Gatad1Q920S3 266 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Bpifa5Q9CQX3 270 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr961Q9EQ84 314 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Vmn1r232A2RTT5 351 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 SftpcP21841 193 aa13.22□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Gm21874J3QNZ6 232 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 AsipQ03288 131 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Prss46Q5M8S2 314 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Htr1dQ61224 374 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr1535Q7TQU0 326 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr958Q8VEY3 312 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Sfxn3Q91V61 321 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr749E9Q438 313 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Rnase9P60154 184 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Defb4P82019 63 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Spink11Q09TK7 88 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Prr15Q9D1T5 122 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Rps2-ps6A0A140T8L5 221 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Olfr918E9PVZ7 325 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Hoxd11P23813 323 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Pmis2Q497Q9 96 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Ankrd55Q8BLD6 626 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Q9DAA3 117 aa13.21□□□□□ -0.29
Pcdha9-201ENSMUST00000115659 Tstd1E9PY03 133 aa13.21□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Fgf11P70378 225 aa13.21□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ccl28Q9JIL2 130 aa13.21□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Ins2P01326 110 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Nhlrc3Q8CCH2 347 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Shisal2bQ9D1Y9 158 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Cd96Q3U0X8 602 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Foxl1Q64731 336 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Prrg4Q8BGN6 226 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr1016A2ASV2 309 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 P18530 117 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Foxa3P35584 353 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr25Q7TRD6 313 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Rbmxl2Q9DAE2 385 aaKnown RBP13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr556E9Q549 324 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Rnase2bO35292 155 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dppa1Q810Y7 116 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr470Q8VF65 314 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Sft2d3Q9CSV6 209 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Tmem139E9PX92 214 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Plp1P60202 277 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr904Q7TRC9 310 aa13.2□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Tcrg-C2A0A075B5Z2 167 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav6d-5A0A075B6B9 112 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Zfp433A0A0J9YUD4 600 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm32687A0A1W2P6H7 600 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Scgb1b24B1B0N6 92 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 P01853 167 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm4791J3QQ14 102 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 BsxQ810B3 232 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr1339Q8VGB1 315 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Q9DAZ5 108 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Slurp1Q9Z0K7 110 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Pf4Q9Z126 105 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 CxadrP97792 365 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Sox21Q811W0 276 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm37797A0A1D5RLC8 261 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gprin2D3Z1D7 455 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Slc25a17O70579 307 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Nkain3Q3URJ8 181 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Gm5615Q3UW02 101 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Prss44Q402U7 372 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 G0s2Q61585 103 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Q8VE95 218 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dcbld1Q9D4J3 503 aa13.19□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav18A0A075B656 109 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Bsph2Q0Q236 131 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 AdoQ6PDY2 256 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Cox19Q8K0C8 92 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Dock6Q8VDR9 2080 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Trav12d-1A0N8R0 115 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Vsig8Q6P3A4 417 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Smim13E9Q942 88 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Hoxa5P09021 270 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Defa24Q5G865 93 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 BC030500E9Q6W0 185 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr139Q60891 315 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr553Q7TRS6 326 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Prss33Q80WM7 277 aa13.18□□□□□ -0.3
Pcdha9-201ENSMUST00000115659 Olfr476Q8VGI4 310 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.4 ms