RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tppp3Q9CRB6 176 aaKnown RBP9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Trav13n-4A0A0G2JG01 110 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ifna6P07350 189 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 MgpP19788 104 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 RhobP62746 196 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 KhkP97328 298 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Wfdc8Q4KUS1 273 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gpr6Q6YNI2 363 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1262Q8VGN2 304 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Cacng8Q8VHW2 423 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Cby1Q9D1C2 127 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ypel1Q9ESC7 118 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ctnnbip1Q9JJN6 81 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ptprz1B9EKR1 2312 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Igkv1-133A0A0B4J1H8 120 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Gcm1P70348 436 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 EcscrQ3TZW0 214 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Arl14eplQ3UKZ7 152 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Prss33Q80WM7 277 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Mob1bQ8BPB0 216 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1408Q8VG32 310 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Hdgfl3Q9JMG7 202 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Trbv12-2A0A0B4J1H1 124 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Slc25a53A2AF28 346 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Mpig6bD7PDD4 242 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 P01790 122 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Pom121l2Q5SW25 972 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1434Q7TQR9 312 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Defa22Q8C1N8 93 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Cysltr2Q920A1 309 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Trem3Q9JKE1 183 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Celsr3Q91ZI0 3301 aa9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Tet2Q4JK59 1912 aaKnown RBP9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Prpf8Q99PV0 2335 aaKnown RBP9.53□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Ighv8-2A0A0A6YW58 119 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Klri1B2KG20 248 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr869E9PX82 323 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Mamld1P0C6A2 803 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Tmem52bQ0VBF2 186 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Pafah1b2Q61206 229 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Cma2Q91VB1 246 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 HpxQ91X72 460 aa9.52□□□□□ -0.88
Topbp1-201ENSMUST00000035164 Olfr1104A2AVB5 310 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 1500009C09RikD3YYW9 81 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 ApohQ01339 345 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Pate4Q09098 99 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Fam19a2Q7TPG7 131 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Tmem204Q7TQI0 226 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Flg2Q2VIS4 2362 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Notch3Q61982 2318 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Zfp979A2A799 407 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Siglec15A7E1W8 342 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 P01796 113 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 P01797 113 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 P01799 113 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 1700009N14RikQ14AA6 216 aaKnown RBP9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gng7Q61016 68 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Usf1Q61069 310 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Ypel4Q65Z93 127 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Rnase6Q9D244 153 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 2200002J24RikQ9D807 110 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Tnfrsf13cQ9D8D0 175 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Phf7Q9DAG9 307 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 NgbQ9ER97 151 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Col5a3Q9JLI2 1739 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Evi2aP20934 223 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Morn2Q6UL01 79 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cdcp2Q8BQH6 427 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Vwc2Q8C8N3 324 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr507Q8VG13 316 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 CenpmQ9CQA0 180 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Lhx2Q9Z0S2 406 aa9.52□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Zfp36l1P23950 338 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 B020031M17RikQ3UT11 173 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Klhdc3Q8VEM9 382 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Mlf1Q9QWV4 267 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Tgfbr3lD3YZZ2 297 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Nat8f4G5E8L3 226 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gpm6bP35803 328 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Tmem184aQ3UFJ6 425 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Spata22Q5SV06 358 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Slc17a2Q5SZA1 478 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Trbv1A0A0B4J1G7 116 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gm45871A0A1B0GRI9 540 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 A0A286YDM5 308 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 BatfO35284 125 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cd3eP22646 189 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Gabrg3P27681 467 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Dazap1Q9JII5 406 aaKnown RBP9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Tmub1Q9JMG3 245 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Taar9Q5QD04 348 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Dnd1Q6VY05 352 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 9930022D16RikQ8BG27 128 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Slc37a1Q8R070 531 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr266Q8VFC3 316 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Olfr195Q8VGQ6 308 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Sdk1Q3UH53 2193 aa9.51□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Cldn1O88551 211 aa9.5□□□□□ -0.89
Topbp1-201ENSMUST00000035164 P01788 123 aa9.5□□□□□ -0.89
Topbp1-201ENSMUST00000035164 Zfp455Q7M6X9 461 aa9.5□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms