RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Olfr251E9Q891 316 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm10020E9QAZ2 204 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Vmn1r78K7N608 313 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 P01788 123 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 CebpgP53568 150 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Dynlrb1P62627 96 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 UngP97931 306 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Hist2h2beQ64524 126 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 TprkbQ8QZZ7 175 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Ms4a3Q920C4 213 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Tmem70Q921N7 253 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Anapc16Q9CPV2 110 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Mrps36Q9CQX8 102 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Rpl15Q9CZM2 204 aaKnown RBP13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 Hs3st3b1Q9QZS6 390 aa13.6□□□□□ -0.23
Shh-201ENSMUST00000002708 AU041133A0A0J9YVH3 498 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Mettl8A2AUU0 281 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm10203F6QJ09 66 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 CideaO70302 217 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 AdtrpQ8C138 230 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Plppr2Q8VCY8 343 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 B3gnt9Q8VI16 399 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm12728V9GX31 77 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Ccl17F6R5P4 103 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 PpoxP51175 477 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Lyplal1Q3UFF7 239 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Gm10840Q3V2K9 103 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Arl11Q6P3A9 176 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr124Q8VGW6 315 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Eaf1Q9D4C5 268 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Cbln1Q9R171 193 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Ros1Q78DX7 2340 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Olfr39E9PVX1 319 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Cst7O89098 144 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 P06323 132 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Ptbp1P17225 527 aaKnown RBP13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 H2-DMb2Q31099 261 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Rab11fip5Q8R361 645 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Gpa33Q9JKA5 319 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Rgs11Q9Z2H1 443 aa13.59□□□□□ -0.23
Shh-201ENSMUST00000002708 Scgb1b10A0A087WPW0 93 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Trav12d-1A0N8R0 115 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Gfra3O35118 397 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 SncaO55042 140 aaKnown RBP13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Q6DIA7 600 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Znf22Q9ERU3 237 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Awat1A2ADU9 328 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Cldn34c3J3QJW5 233 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Cldn34c2J3QNM1 233 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm16686Q3UMN9 131 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Znf48Q3US17 591 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Fa2hQ5MPP0 372 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Cldn34c1Q8K193 234 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Pbp2Q8VIN1 187 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Prss28Q924N9 274 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Bpifa5Q9CQX3 270 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Tmem178aQ9CZ16 297 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 Atp6v1fQ9D1K2 119 aa13.58□□□□□ -0.24
Shh-201ENSMUST00000002708 BC053393A0A0B4J1F6 192 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 1700084M14RikB1AT01 78 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 A930017K11RikE0CXQ2 571 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr624F8VQI7 308 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 RhodP97348 210 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Q0VG49 157 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr1356Q7TQU8 320 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Cnot1Q6ZQ08 2375 aaKnown RBP13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 P01674 108 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Gabra2P26048 451 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Neurog3P70661 214 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Npy6rQ61212 371 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 AgerQ62151 402 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Kcnip4Q6PHZ8 250 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Wdr83osQ6ZWX0 106 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr770Q8VGC2 311 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 HpxQ91X72 460 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Rab29Q91YQ1 204 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Ykt6Q9CQW1 198 aa13.57□□□□□ -0.24
Shh-201ENSMUST00000002708 Gm4884E9PVP9 694 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 GzmfP08883 248 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Sfrp2P97299 295 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 MidnQ3TPJ7 465 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Prdx2Q61171 198 aaKnown RBP13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 C130073F10RikQ8C4L8 201 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Scp2d1Q9DAH1 156 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Gng12Q9DAS9 72 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Cd200r1Q9ES57 326 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Ighv5-17A0A075B5R1 117 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Ighv7-2A0A0A6YX91 119 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Igkv19-93A0A0G2JFZ3 115 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Vmn1r232A2RTT5 351 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr1154L7MU57 310 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Spam1P48794 512 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Slc35b1P97858 322 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Cd96Q3U0X8 602 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Q80VP5 184 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Olfr1448Q8VFX1 314 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Gar1Q9CY66 231 aaKnown RBP13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Try5Q9QUK9 246 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 Try4Q9R0T7 246 aa13.56□□□□□ -0.24
Shh-201ENSMUST00000002708 CadB2RQC6 2225 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 103.4 ms