RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 TNRC6AQ8NDV7 1962 aaKnown RBP8.57□□□□□ -1.04
POLR2A-209ENST00000617998 LRCOL1A6NCL2 159 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 HMSDA8MTL9 139 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 GFI1BQ5VTD9 330 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 TMEM136Q6ZRR5 245 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 LINC00482Q8N8I6 264 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 U3KQE9 123 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 ZNF503Q96F45 646 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 SHANK2-AS3Q9BTD1 123 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 HLA-DMBP28068 263 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 Q8N9W7 124 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 TMEM160Q9NX00 188 aa8.57□□□□□ -1.04
POLR2A-209ENST00000617998 NEGR1Q7Z3B1 354 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 ARL6IP6Q8N6S5 226 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 C11orf71Q6IPW1 123 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 DEFB104AQ8WTQ1 72 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 TMEM190Q8WZ59 177 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 SPTBN4Q9H254 2564 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 A0A1B0GW15 77 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 GSN-AS1Q9NRJ2 163 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 ADAMTSL5Q6ZMM2 481 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 C5orf24Q7Z6I8 188 aa8.56□□□□□ -1.04
POLR2A-209ENST00000617998 RPL18AQ02543 176 aaKnown RBP8.56□□□□□ -1.04
POLR2A-209ENST00000617998 C12orf57Q99622 126 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 CEP192Q8TEP8 1941 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 A0A0A6YYD4 124 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 TIRAPP58753 221 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 CDSNQ15517 529 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 NPBQ8NG41 125 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 TMEM126AQ9H061 195 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 TSPAN13O95857 204 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 NFE4Q86UQ8 179 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 CADM3Q8N126 398 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 OR10AG1Q8NH19 301 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 DERL1Q9BUN8 251 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 TEX43Q6ZNM6 134 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 LYPD1Q8N2G4 141 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 C14orf178Q8N769 122 aaPredicted RBP8.55□□□□□ -1.04
POLR2A-209ENST00000617998 MARVELD1Q9BSK0 173 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 ALPK3Q96L96 1907 aa8.55□□□□□ -1.04
POLR2A-209ENST00000617998 APOHP02749 345 aaPredicted RBP8.54□□□□□ -1.04
POLR2A-209ENST00000617998 M0R2P5 195 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 GTF2H5Q6ZYL4 71 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 C18orf15Q96N68 181 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 PHOX2AO14813 284 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 MT-ND6P03923 174 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 GTSF1Q8WW33 167 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 NDUFA4L2Q9NRX3 87 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 DOPEY1Q5JWR5 2465 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.54□□□□□ -1.04
POLR2A-209ENST00000617998 DENND4AQ7Z401 1863 aa8.54□□□□□ -1.04
POLR2A-209ENST00000617998 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 RASL10AQ92737 203 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
POLR2A-209ENST00000617998 CXCL2P19875 107 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 GPHB5Q86YW7 130 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 ZC2HC1AQ96GY0 325 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
POLR2A-209ENST00000617998 TNCP24821 2201 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.042e-6■■□□□ 13
POLR2A-209ENST00000617998 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 NMSQ5H8A3 153 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 PDE6HQ13956 83 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
POLR2A-209ENST00000617998 RNF152Q8N8N0 203 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 C2CD3Q4AC94 2353 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 ODF1Q14990 250 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 MLANAQ16655 118 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 ODF3L1Q8IXM7 274 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 TMEM61Q8N0U2 210 aa8.53□□□□□ -1.04
POLR2A-209ENST00000617998 VCYO14598 125 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 A0A087WWC5 75 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 A0A1W2PRE2 83 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 C5orf30Q96GV9 206 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 SCO2A0A1W2PP80 73 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 KLF5Q13887 457 aaPredicted RBP8.52□□□□□ -1.05
POLR2A-209ENST00000617998 UQCC3Q6UW78 93 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 IGHV1-24A0A0C4DH33 117 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 ORMDL2Q53FV1 153 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 LY96Q9Y6Y9 160 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 V9GYH0 126 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 IGHV3-38A0A0C4DH36 116 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 ABCA12Q86UK0 2595 aa8.52□□□□□ -1.05
POLR2A-209ENST00000617998 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 LINC01548A6NM66 108 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 C15orf65H3BRN8 121 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 OR11H7Q8NGC8 314 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 LRRK1Q38SD2 2015 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 COX11Q9Y6N1 276 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 hDV102S1A0JD36 115 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 A6NDN8 102 aa8.51□□□□□ -1.05
POLR2A-209ENST00000617998 H3BQ15 152 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms