RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SCGB2A1O75556 95 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 MSMBP08118 114 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
CDH1-213ENST00000612417 ZNF493Q6ZR52 646 aa11.44□□□□□ -0.58
CDH1-213ENST00000612417 CELSR1Q9NYQ6 3014 aa11.43□□□□□ -0.58
CDH1-213ENST00000612417 OR4C46A6NHA9 309 aa11.43□□□□□ -0.58
CDH1-213ENST00000612417 NDUFB8O95169 186 aa11.43□□□□□ -0.58
CDH1-213ENST00000612417 CSN1S1P47710 185 aa11.43□□□□□ -0.58
CDH1-213ENST00000612417 FAM106CPP0CH98 169 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 EGR2P11161 476 aaPredicted RBP11.42□□□□□ -0.58
CDH1-213ENST00000612417 KLK9Q2XQG4 91 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 PRSS57Q6UWY2 283 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 C8orf49Q96NF6 230 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 ST20Q9HBF5 79 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 KLK9Q9UKQ9 250 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 NAV2Q8IVL1 2488 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 TRAV40A0A0B4J280 105 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 B4DSR2 109 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 CTSGP08311 255 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 LINC00173Q6ZV60 143 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 STPG4Q8N801 248 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 AJUBAQ96IF1 538 aa11.42□□□□□ -0.58
CDH1-213ENST00000612417 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.41□□□□□ -0.58
CDH1-213ENST00000612417 IGHV1-69DA0A0B4J2H0 117 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 IGHV1-69P01742 117 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 PET117Q6UWS5 81 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 ASCL2Q99929 193 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 HIF1ANQ9NWT6 349 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 HSPB8Q9UJY1 196 aa11.41□□□□□ -0.58
CDH1-213ENST00000612417 HELZ2Q9BYK8 2649 aaKnown RBP11.41□□□□□ -0.58
CDH1-213ENST00000612417 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 S100A7P31151 101 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 DEFB113Q30KQ7 82 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 BRD3OSQ6XYD6 125 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 Q8N9W7 124 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 MAP1LC3CQ9BXW4 147 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 TMEM191AQ9H0A3 160 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 BEX4Q9NWD9 120 aaPredicted RBP11.4□□□□□ -0.58
CDH1-213ENST00000612417 RABAC1Q9UI14 185 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 APCP25054 2843 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 TFPI2P48307 235 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 AP5S1Q9NUS5 200 aa11.4□□□□□ -0.58
CDH1-213ENST00000612417 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 SH2D1AO60880 128 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 ZNF138P52744 262 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 HIST2H2BCQ6DN03 193 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 MAPK1IP1LQ8NDC0 245 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 PRR25Q96S07 402 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 U3KQK5 164 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 CSMD1Q96PZ7 3565 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
CDH1-213ENST00000612417 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
CDH1-213ENST00000612417 IGKV2-40A0A087WW87 121 aaPredicted RBP11.38□□□□□ -0.59
CDH1-213ENST00000612417 RNF223E7ERA6 249 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 IGKV2D-40P01614 121 aaPredicted RBP11.38□□□□□ -0.59
CDH1-213ENST00000612417 IGHV3-23P01764 117 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 IGHV4-38-2P0DP08 117 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 LINC01356Q8N9X3 169 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
CDH1-213ENST00000612417 IGHG4P01861 327 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
CDH1-213ENST00000612417 Q5PR19 223 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 CSPG4Q6UVK1 2322 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 CSN3P07498 182 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 PRB4P10163 310 aaPredicted RBP11.37□□□□□ -0.59
CDH1-213ENST00000612417 RAB9AP51151 201 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 OR4C5Q8NGB2 326 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 ZNF502Q8TBZ5 544 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 PSMG3-AS1Q96PY0 264 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 TPPP3Q9BW30 176 aa11.37□□□□□ -0.59
CDH1-213ENST00000612417 A0A087X0K7 114 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 GATA3P23771 443 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 FA2HQ7L5A8 372 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 LRRC75A-AS1Q8N1F1 130 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 OR10AG1Q8NH19 301 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 ZFHX3Q15911 3703 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 HINT1P49773 126 aaPredicted RBP11.36□□□□□ -0.59
CDH1-213ENST00000612417 OCIAD2Q56VL3 154 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 PRSS3P2Q8NHM4 247 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 ZNF747Q9BV97 191 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 ZFAND3Q9H8U3 227 aa11.36□□□□□ -0.59
CDH1-213ENST00000612417 A0A096LNT2 108 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 K7ERU9 68 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 TGFAP01135 160 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 C15orf32Q32M92 178 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 ZANQ9Y493 2812 aa11.35□□□□□ -0.59
CDH1-213ENST00000612417 TMEM213A2RRL7 107 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 D6R8Y8 96 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 IGLC6P0CF74 106 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
CDH1-213ENST00000612417 ORMDL3Q8N138 153 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms