RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 COX8CQ7Z4L0 72 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 GBGT1Q8N5D6 347 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 DCANP1Q8TF63 244 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 ZC2HC1AQ96GY0 325 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 BTF3L4Q96K17 158 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 PRR25Q96S07 402 aa16.3■□□□□ 0.2
USP6NL-204ENST00000606752 BAHCC1Q9P281 2608 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 CCL24O00175 119 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 ERCC8Q13216 396 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 ADAMTSL5Q6ZMM2 481 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 ZNF738Q8NE65 137 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 SRSF2Q01130 221 aaKnown RBP16.29■□□□□ 0.2
USP6NL-204ENST00000606752 FHL3Q13643 280 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 C8orf49Q96NF6 230 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 MS4A6AQ9H2W1 248 aa16.29■□□□□ 0.2
USP6NL-204ENST00000606752 TRAV9-1A0A075B6T8 112 aa16.28■□□□□ 0.2
USP6NL-204ENST00000606752 P01737 135 aa16.28■□□□□ 0.2
USP6NL-204ENST00000606752 ID1P41134 155 aa16.28■□□□□ 0.2
USP6NL-204ENST00000606752 Q8TAT8 98 aa16.28■□□□□ 0.2
USP6NL-204ENST00000606752 AGPAT4-IT1Q9H0P7 198 aa16.28■□□□□ 0.2
USP6NL-204ENST00000606752 CT45A10P0DMU9 189 aa16.27■□□□□ 0.2
USP6NL-204ENST00000606752 C9orf47Q6ZRZ4 202 aa16.27■□□□□ 0.2
USP6NL-204ENST00000606752 NDFIP1Q9BT67 221 aa16.27■□□□□ 0.2
USP6NL-204ENST00000606752 F8P00451 2351 aa16.27■□□□□ 0.2
USP6NL-204ENST00000606752 SETD2Q9BYW2 2564 aaPredicted RBP16.27■□□□□ 0.19
USP6NL-204ENST00000606752 SMIM27A0A1W2PRY6 76 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 C1orf196B1AJZ1 125 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 OVOL1O14753 267 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 CA1P00915 261 aaPredicted RBP16.26■□□□□ 0.19
USP6NL-204ENST00000606752 TMEM78Q5T7P6 136 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 RPP21Q9H633 154 aaKnown RBP16.26■□□□□ 0.19
USP6NL-204ENST00000606752 NPIPB6E9PJ23 425 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 TYMSP04818 313 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 CRIP1P50238 77 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 WFDC3Q8IUB2 231 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 SRD5A3Q9H8P0 318 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 PPP1R14DQ9NXH3 145 aa16.26■□□□□ 0.19
USP6NL-204ENST00000606752 CSN3P07498 182 aa16.25■□□□□ 0.19
USP6NL-204ENST00000606752 ZNF138P52744 262 aa16.25■□□□□ 0.19
USP6NL-204ENST00000606752 CT83Q5H943 113 aa16.25■□□□□ 0.19
USP6NL-204ENST00000606752 OR4B1Q8NGF8 309 aa16.25■□□□□ 0.19
USP6NL-204ENST00000606752 GPR61Q9BZJ8 451 aa16.25■□□□□ 0.19
USP6NL-204ENST00000606752 A0A1B0GUS0 222 aa16.24■□□□□ 0.19
USP6NL-204ENST00000606752 TSKUQ8WUA8 353 aa16.24■□□□□ 0.19
USP6NL-204ENST00000606752 K7EQG2 157 aa16.24■□□□□ 0.19
USP6NL-204ENST00000606752 OR10J6PQ8NGY7 276 aa16.24■□□□□ 0.19
USP6NL-204ENST00000606752 SETXQ7Z333 2677 aaKnown RBP16.23■□□□□ 0.19
USP6NL-204ENST00000606752 A8MWL6 223 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 TCL1AP56279 114 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 RAB5BP61020 215 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 PAFAH1B2P68402 229 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 SMUG1Q53HV7 270 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 LINC00477Q96M19 166 aa16.23■□□□□ 0.19
USP6NL-204ENST00000606752 TFPI2P48307 235 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 FAM162BQ5T6X4 162 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 ADARB2-AS1A8MUL3 147 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 SNRPD3P62318 126 aaKnown RBP16.22■□□□□ 0.19
USP6NL-204ENST00000606752 OR8A1Q8NGG7 326 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 OR2D3Q8NGH3 330 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 LENEPQ9Y5L5 61 aa16.22■□□□□ 0.19
USP6NL-204ENST00000606752 C2CD3Q4AC94 2353 aa16.21■□□□□ 0.19
USP6NL-204ENST00000606752 TRGC2P03986 189 aa16.21■□□□□ 0.19
USP6NL-204ENST00000606752 ZNF705DP0CH99 300 aaPredicted RBP16.21■□□□□ 0.19
USP6NL-204ENST00000606752 ZNF705BP0CI00 300 aaPredicted RBP16.21■□□□□ 0.19
USP6NL-204ENST00000606752 RPL19P84098 196 aaKnown RBP16.21■□□□□ 0.19
USP6NL-204ENST00000606752 ZFP82Q8N141 532 aa16.21■□□□□ 0.19
USP6NL-204ENST00000606752 NAT8BQ9UHF3 227 aa16.21■□□□□ 0.19
USP6NL-204ENST00000606752 IZUMO1RA6ND01 250 aa16.2■□□□□ 0.18
USP6NL-204ENST00000606752 KRTAP10-3P60369 221 aa16.2■□□□□ 0.18
USP6NL-204ENST00000606752 NEU1Q99519 415 aa16.2■□□□□ 0.18
USP6NL-204ENST00000606752 SH2D1AO60880 128 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 ZNF80P51504 273 aaPredicted RBP16.19■□□□□ 0.18
USP6NL-204ENST00000606752 DYNLRB2Q8TF09 96 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 GFRA4Q9GZZ7 299 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 FAM231BA6NCW3 169 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 CYSRT1A8MQ03 144 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 F6UB75 175 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 ZNF688P0C7X2 276 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 DEFB1P60022 68 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 HIST1H1AQ02539 215 aaPredicted RBP16.19■□□□□ 0.18
USP6NL-204ENST00000606752 DEFB114Q30KQ6 69 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 NSUN5P1Q3KNT7 163 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 RBPMS2Q6ZRY4 209 aaKnown RBP16.19■□□□□ 0.18
USP6NL-204ENST00000606752 NDUFA11Q86Y39 141 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 NUP35Q8NFH5 326 aa16.19■□□□□ 0.18
USP6NL-204ENST00000606752 FABP5P3A8MUU1 101 aa16.18■□□□□ 0.18
USP6NL-204ENST00000606752 HIGD1CA8MV81 97 aa16.18■□□□□ 0.18
USP6NL-204ENST00000606752 SIGLEC8Q9NYZ4 499 aa16.18■□□□□ 0.18
USP6NL-204ENST00000606752 TRAV2A0A0B4J234 112 aa16.17■□□□□ 0.18
USP6NL-204ENST00000606752 PSMG4Q5JS54 123 aa16.17■□□□□ 0.18
USP6NL-204ENST00000606752 SPINK4O60575 86 aa16.17■□□□□ 0.18
USP6NL-204ENST00000606752 TMEM61Q8N0U2 210 aa16.17■□□□□ 0.18
USP6NL-204ENST00000606752 GTSF1Q8WW33 167 aa16.17■□□□□ 0.18
USP6NL-204ENST00000606752 PHOX2AO14813 284 aa16.16■□□□□ 0.18
USP6NL-204ENST00000606752 TMEM189A5PLL7 270 aa16.15■□□□□ 0.18
USP6NL-204ENST00000606752 TRBV7-9A0A0J9YWB2 115 aa16.15■□□□□ 0.18
USP6NL-204ENST00000606752 FOXA3P55318 350 aaPredicted RBP16.15■□□□□ 0.18
USP6NL-204ENST00000606752 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.15■□□□□ 0.18
USP6NL-204ENST00000606752 FAM19A4Q96LR4 140 aa16.15■□□□□ 0.18
USP6NL-204ENST00000606752 XKRY2A2RUG3 117 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms