RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 PSMB2P49721 201 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 ERCC8Q13216 396 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 ZNF474Q6S9Z5 364 aaPredicted RBP12.1□□□□□ -0.47
RER1-209ENST00000605895 PRSS33Q8NF86 280 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 SPRY4Q9C004 299 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 UFC1Q9Y3C8 167 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 SPTA1P02549 2419 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 TECTAO75443 2155 aa12.1□□□□□ -0.47
RER1-209ENST00000605895 H3BVH4 76 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 DPM2O94777 84 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 GLRXP35754 106 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 ZFP2Q6ZN57 461 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 IGHV3-66A0A0C4DH42 116 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 J3KRW8 73 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 FHL3Q13643 280 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 Q6ZQT7 251 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 RNF183Q96D59 192 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 SPATA25Q9BR10 227 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
RER1-209ENST00000605895 NFE4Q86UQ8 179 aa12.08□□□□□ -0.47
RER1-209ENST00000605895 TTC9CQ8N5M4 171 aa12.08□□□□□ -0.47
RER1-209ENST00000605895 AAMDCQ9H7C9 122 aa12.08□□□□□ -0.47
RER1-209ENST00000605895 ARRDC1-AS1Q9H2J1 176 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 MRPL16Q9NX20 251 aaKnown RBP12.08□□□□□ -0.48
RER1-209ENST00000605895 TM4SF5O14894 197 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 TRGV3P03979 118 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 MC5RP33032 325 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 RNF125Q96EQ8 232 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 DKK4Q9UBT3 224 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 SIGLEC9Q9Y336 463 aa12.08□□□□□ -0.48
RER1-209ENST00000605895 MRAP2Q96G30 205 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 SHANK2-AS3Q9BTD1 123 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 U3KQK5 164 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 LAMTOR5O43504 91 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 SCGB1A1P11684 91 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 EMP1P54849 157 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 SEM1Q6ZVN7 128 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 PPP1R27Q86WC6 154 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 PLSCR4Q9NRQ2 329 aa12.07□□□□□ -0.48
RER1-209ENST00000605895 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 XGP55808 180 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 ZNF491Q8N8L2 437 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 LYNX1G3V0Z9 82 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 LYNX1P0DP58 116 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 KIR2DL4Q99706 377 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
RER1-209ENST00000605895 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 A0A1B0GW15 77 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 TEX22C9J3V5 150 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 HOXB4P17483 251 aaPredicted RBP12.05□□□□□ -0.48
RER1-209ENST00000605895 RRN3P1Q2M238 152 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 RPEQ96AT9 228 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 NDUFB3O43676 98 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 RNF182Q8N6D2 247 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 PRO0461Q9UI25 63 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 LINC01549A6NIU2 74 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 I3L2K1 104 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 FOXI1Q12951 378 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 Q6AWC8 147 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 PRR25Q96S07 402 aa12.05□□□□□ -0.48
RER1-209ENST00000605895 MAP1AP78559 2803 aaPredicted RBP12.04□□□□□ -0.48
RER1-209ENST00000605895 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
RER1-209ENST00000605895 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
RER1-209ENST00000605895 C1orf162Q8NEQ5 155 aaPredicted RBP12.04□□□□□ -0.48
RER1-209ENST00000605895 CDIP1Q9H305 208 aa12.04□□□□□ -0.48
RER1-209ENST00000605895 VKORC1Q9BQB6 163 aa12.04□□□□□ -0.48
RER1-209ENST00000605895 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 TMEM14CQ9P0S9 112 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 HIGD1BQ9P298 99 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 FAM90A27PA6NNH2 459 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 PRAC2D3DTV9 90 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 H3BRN7 92 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 PRSS29PA6NIE9 313 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 K7EIM0 57 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
RER1-209ENST00000605895 SCGB1D4Q6XE38 83 aa12.03□□□□□ -0.48
RER1-209ENST00000605895 NCBP2LA6PVI3 153 aaKnown RBP12.02□□□□□ -0.49
RER1-209ENST00000605895 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.492e-6■□□□□ 8.7
RER1-209ENST00000605895 TDHQ8IZJ6 230 aa12.02□□□□□ -0.49
RER1-209ENST00000605895 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.49
RER1-209ENST00000605895 IGLV3-9A0A075B6K5 115 aa12.02□□□□□ -0.49
RER1-209ENST00000605895 MORN3Q6PF18 240 aaPredicted RBP12.02□□□□□ -0.49
RER1-209ENST00000605895 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.49
RER1-209ENST00000605895 B5MCH6 92 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 GATA4P43694 442 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 H7C2G1 150 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 HES1Q14469 280 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 ZMAT4Q9H898 229 aa12.01□□□□□ -0.49
RER1-209ENST00000605895 LOXP28300 417 aaPredicted RBP12□□□□□ -0.49
RER1-209ENST00000605895 C1orf210Q8IVY1 113 aa12□□□□□ -0.49
RER1-209ENST00000605895 GATD1Q8NB37 220 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms