RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 IGHV1-2P23083 117 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
LIG3-211ENST00000588713 MYCNOSP40205 109 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 CSN1S1P47710 185 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 CEBPDP49716 269 aaPredicted RBP3.26□□□□□ -1.89
LIG3-211ENST00000588713 AESQ08117 197 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 ADIPOQQ15848 244 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 LGALS9BQ3B8N2 356 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 CT45A1Q5HYN5 189 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 Q6AWC8 147 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 C16orf54Q6UWD8 224 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 BRD3OSQ6XYD6 125 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 RBPMS2Q6ZRY4 209 aaKnown RBP3.26□□□□□ -1.89
LIG3-211ENST00000588713 SSX8Q7RTT4 187 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 MDP1Q86V88 176 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 TUSC5Q8IXB3 177 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 THAP8Q8NA92 274 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 OR2Z1Q8NG97 314 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 OR10AG1Q8NH19 301 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 CT45A3Q8NHU0 189 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 LRRC29Q8WV35 223 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 CACNG8Q8WXS5 425 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 SLC25A33Q9BSK2 321 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 MLST8Q9BVC4 326 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 NPFFR1Q9GZQ6 430 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 SIGLEC8Q9NYZ4 499 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 KLF12Q9Y4X4 402 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 SLC25A15Q9Y619 301 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 HLA-DRB4X5D2U9 266 aa3.26□□□□□ -1.89
LIG3-211ENST00000588713 DSCAML1Q8TD84 2053 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 IGHV3-43A0A0B4J1X8 118 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 A0A0G2JLM5 398 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TEX50A0A1B0GTY4 177 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TCRBV4S1A1TA0A5B7 111 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TMEM189A5PLL7 270 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 PPIAL4DF5H284 164 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 J3QR89 54 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 CHEK1O14757 476 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 MGST3O14880 152 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 COX7A2P2O60397 106 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 LTAP01374 205 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 P01737 135 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 IGHV3-9P01782 118 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 APOA2P02652 100 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 RBMY1CP0DJD4 496 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 PPIAL4GP0DN37 164 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 IGHV3-43DP0DP04 118 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 RNASE2P10153 161 aaKnown RBP3.25□□□□□ -1.89
LIG3-211ENST00000588713 FABP2P12104 132 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 LGALS7P47929 136 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 EGFEM1PQ0D2K5 195 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 KIR3DS1Q14943 382 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TMEM177Q53S58 311 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 C10orf113Q5VZT2 155 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 WDR82Q6UXN9 313 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 Q6YL49 198 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 FOXI2Q6ZQN5 318 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 Q6ZT83 130 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 C9orf139Q6ZV77 190 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 ERASQ7Z444 233 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 Q86TA4 180 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 PDPNQ86YL7 162 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 BOD1L2Q8IYS8 172 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 ABHD12Q8N2K0 398 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TEX45Q8NA69 505 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 OR5AN1Q8NGI8 311 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 OR2K2Q8NGT1 345 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 VSTM2AQ8TAG5 236 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 PIFOQ8TCI5 191 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 BLNKQ8WV28 456 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 FXYD5Q96DB9 178 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 GPR82Q96P67 336 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 SPATA25Q9BR10 227 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 PAXXQ9BUH6 204 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 SSBP3Q9BWW4 388 aaPredicted RBP3.25□□□□□ -1.89
LIG3-211ENST00000588713 PRSS22Q9GZN4 317 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 C16orf95Q9H693 158 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 AP5S1Q9NUS5 200 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 GNG12Q9UBI6 72 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 TP73-AS1Q9UF72 201 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 SIGLEC9Q9Y336 463 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 SPCS1Q9Y6A9 102 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 HSPG2P98160 4391 aa3.25□□□□□ -1.89
LIG3-211ENST00000588713 IGKV1OR2-108A0A075B7D4 117 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.24□□□□□ -1.89
LIG3-211ENST00000588713 TRAV3A0A0B4J244 114 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 A0A1W2PRX2 142 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 SH2D7A6NKC9 451 aaPredicted RBP3.24□□□□□ -1.89
LIG3-211ENST00000588713 VSTM5A8MXK1 200 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 H3BUT2 72 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 UPK2O00526 184 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 PROP1O75360 226 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 FSTL3O95633 263 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 IGHV4-59P01825 116 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 APOHP02749 345 aaPredicted RBP3.24□□□□□ -1.89
LIG3-211ENST00000588713 GRPP07492 148 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 SAA2P0DJI9 122 aaPredicted RBP3.24□□□□□ -1.89
LIG3-211ENST00000588713 CAMPP49913 170 aa3.24□□□□□ -1.89
LIG3-211ENST00000588713 FOXG1P55316 489 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms