RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001		H3BRN7	92 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	FCER1G	P30273	86 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	HIF1AN	Q9NWT6	349 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	PRSS1	P07477	247 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	ATP5I	P56385	69 aa	Predicted RBP	11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	KIR3DS1	Q14943	382 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	TIMD4	Q96H15	378 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	VPS25	Q9BRG1	176 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	KAAG1	Q9UBP8	84 aa		11.54	□□□□□ -0.56
PRPF8-216	ENST00000577001	BVES-AS1	Q5T3Y7	98 aa		11.53	□□□□□ -0.56
PRPF8-216	ENST00000577001	RAB1B	Q9H0U4	201 aa		11.53	□□□□□ -0.56
PRPF8-216	ENST00000577001	SMAD5-AS1	Q9Y6J3	95 aa		11.53	□□□□□ -0.56
PRPF8-216	ENST00000577001	JMJD1C	Q15652	2540 aa		11.53	□□□□□ -0.56
PRPF8-216	ENST00000577001		F6UB75	175 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	ATP6V0E1	O15342	81 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	IGKV3-20	P01619	116 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	TRGV3	P03979	118 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	ZNF747	Q9BV97	191 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	AGRN	O00468	2067 aa		11.52	□□□□□ -0.56
PRPF8-216	ENST00000577001	EPG5	Q9HCE0	2579 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001		F8W735	103 aa	Predicted RBP	11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001		H3BUT2	72 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	TAX1BP3	O14907	124 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	FBN2	P35556	2912 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001		K7ERJ3	54 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	CTSG	P08311	255 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	UBE2V1	Q13404	147 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	ATP5L2	Q7Z4Y8	100 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	GTSCR1	Q86UQ5	136 aa		11.52	□□□□□ -0.57
PRPF8-216	ENST00000577001	RIPPLY3	P57055	190 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	ADORA2A-AS1	P86434	159 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	PSG9	Q00887	426 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	NEGR1	Q7Z3B1	354 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	OR10AG1	Q8NH19	301 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001		A0A096LNJ9	63 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	FER1L6-AS1	Q8NA97	138 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	CFHR4	Q92496	578 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	ABCA2	Q9BZC7	2435 aa		11.51	□□□□□ -0.57
PRPF8-216	ENST00000577001	SAP30	O75446	220 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	MAPK1IP1L	Q8NDC0	245 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	PRR25	Q96S07	402 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	BPESC1	Q9GZL8	116 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	JKAMP	Q9P055	326 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	TRBV12-3	P01733	135 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	EMP1	P54849	157 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	PIP4P2	Q8N4L2	257 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	VKORC1	Q9BQB6	163 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	TMEM160	Q9NX00	188 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	RABAC1	Q9UI14	185 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	HSPB8	Q9UJY1	196 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001		M0R381	172 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	HAX1	O00165	279 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	LEP	P41159	167 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	TMEM30B	Q3MIR4	351 aa		11.5	□□□□□ -0.57
PRPF8-216	ENST00000577001	NOTCH2	Q04721	2471 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	EDN2	P20800	178 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	GCSH	P23434	173 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	C3orf36	Q3SXR2	165 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	FAM162B	Q5T6X4	162 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	NRGN	Q92686	78 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	IGHV7-81	A0A0B4J1V7	117 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	SAA4	P35542	130 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	EFNA4	P52798	201 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	ZNF492	Q9P255	531 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	MTOR	P42345	2549 aa		11.49	□□□□□ -0.57
PRPF8-216	ENST00000577001	LY6L	H3BQJ8	138 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	ORMDL3	Q8N138	153 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	C11orf21	Q9P2W6	132 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	MRPS16	Q9Y3D3	137 aa	Known RBP	11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	FAM231B	A6NCW3	169 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	NBL1	P41271	181 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	NDFIP1	Q9BT67	221 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	SCRT2	Q9NQ03	307 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	OVOL3	O00110	214 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	CHCHD1	Q96BP2	118 aa	Known RBP	11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	FOXC2	Q99958	501 aa		11.48	□□□□□ -0.57
PRPF8-216	ENST00000577001	IGKV2D-26	A0A0A0MRZ7	120 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001		K7ENP7	123 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	CEACAM3	P40198	252 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	FAM104B	Q5XKR9	115 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	RASL11A	Q6T310	242 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	IGLV11-55	A0A075B6I3	123 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	INS-IGF2	F8WCM5	200 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001		H3BVH4	76 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	AP1S3	Q96PC3	154 aa		11.47	□□□□□ -0.57
PRPF8-216	ENST00000577001	ACAN	P16112	2415 aa		11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	NF1	P21359	2839 aa		11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	MRPS12	O15235	138 aa	Known RBP	11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	NDUFA3	O95167	84 aa		11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	IGHG4	P01861	327 aa		11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	IFI27L1	Q96BM0	104 aa		11.46	□□□□□ -0.57
PRPF8-216	ENST00000577001	OR2K2	Q8NGT1	345 aa		11.46	□□□□□ -0.58
PRPF8-216	ENST00000577001	HTN1	P15515	57 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	TMEM95	Q3KNT9	176 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	ZC2HC1B	Q5TFG8	222 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	IGF2-AS	Q6U949	168 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	ZNF562	Q6V9R5	426 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	C2orf91	Q6ZV80	131 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	TNFRSF14	Q92956	283 aa		11.45	□□□□□ -0.58
PRPF8-216	ENST00000577001	ZNF462	Q96JM2	2506 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms