RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 TRAV13-1A0A0B4J241 112 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 C5orf58C9J3I9 102 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 PPYP01298 95 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 TRACP01848 142 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 SAA1P0DJI8 122 aaPredicted RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 RPS3P23396 243 aaKnown RBP eCLIP0.82□□□□□ -2.28
CDC27-219ENST00000576484 MAXP61244 160 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 RPS28P62857 69 aaKnown RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 TMEM35BQ8NCS4 154 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 MORN4Q8NDC4 146 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 GINS2Q9Y248 185 aa0.82□□□□□ -2.28
CDC27-219ENST00000576484 NUP210Q8TEM1 1887 aaPredicted RBP0.82□□□□□ -2.28
CDC27-219ENST00000576484 MED12Q93074 2177 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 E9PCH4 1651 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 ASCC3Q8N3C0 2202 aaKnown RBP0.81□□□□□ -2.28
CDC27-219ENST00000576484 SIP14410 1827 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 LOC107984640A0A0U1RRK4 108 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 EFNA4P52798 201 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 SPATA45Q537H7 98 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 LINC00299Q6ZSB3 139 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 TEX29Q8N6K0 151 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 OR5AK2Q8NH90 309 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 NAT14Q8WUY8 206 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 CLEC2BQ92478 149 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 WFDC10AQ9H1F0 79 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 NIT2Q9NQR4 276 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 CBLN4Q9NTU7 201 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 PTPRFP10586 1907 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 CASP8AP2Q9UKL3 1982 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 CNTRLQ7Z7A1 2325 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 ERBINQ96RT1 1412 aa0.81□□□□□ -2.28
CDC27-219ENST00000576484 A2MP01023 1474 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 DLC1Q96QB1 1528 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 A0A0J9YY99 117 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 FOXA3P55318 350 aaPredicted RBP0.8□□□□□ -2.28
CDC27-219ENST00000576484 GLIPR1L1Q6UWM5 242 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 CASC2Q6XLA1 102 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 ZCCHC23Q6ZST2 131 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 Q8N6K4 173 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 TMEM229BQ8NBD8 167 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 SPANXA1Q9NS26 97 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 CHD3Q12873 2000 aaKnown RBP0.8□□□□□ -2.28
CDC27-219ENST00000576484 ANKRD31Q8N7Z5 1873 aa0.8□□□□□ -2.28
CDC27-219ENST00000576484 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.79□□□□□ -2.28
CDC27-219ENST00000576484 ARL5CA6NH57 179 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 CRYGSP22914 178 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 RPL22P35268 128 aaKnown RBP0.79□□□□□ -2.28
CDC27-219ENST00000576484 LINC00575Q6W349 94 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 OR5A2Q8NGI9 324 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 OR10AC1Q8NH08 325 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 CIB3Q96Q77 187 aaPredicted RBP0.79□□□□□ -2.28
CDC27-219ENST00000576484 NABP2Q9BQ15 211 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 FAM135BQ49AJ0 1406 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 TET1Q8NFU7 2136 aa0.79□□□□□ -2.28
CDC27-219ENST00000576484 C3orf85A0A1B0GTC6 90 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 LOC107986453A0A1B0GWG9 222 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 A0A1W2PPM0 123 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 J3KT08 172 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 IGLV3-1P01715 115 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 CCL4P13236 92 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 LSM3P62310 102 aaKnown RBP0.78□□□□□ -2.28
CDC27-219ENST00000576484 CCSMST1Q4G0I0 132 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 IZUMO2Q6UXV1 221 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 AKAP14Q86UN6 197 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 SBSPONQ8IVN8 264 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 SPANXCQ9NY87 97 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 FKBP11Q9NYL4 201 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 MPC1Q9Y5U8 109 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 ANKRD30AQ9BXX3 1397 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 ARAP1Q96P48 1450 aa0.78□□□□□ -2.28
CDC27-219ENST00000576484 PHRF1Q9P1Y6 1649 aaKnown RBP0.78□□□□□ -2.29
CDC27-219ENST00000576484 TRAV23DV6A0A075B6W5 121 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 A0A1B0GX51 115 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 A6NN06 94 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 SLC25A4P12235 298 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 PDE6GP18545 87 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 OR51A4Q8NGJ6 313 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 BRK1Q8WUW1 75 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 PYDC1Q8WXC3 89 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 MED23Q9ULK4 1368 aa0.77□□□□□ -2.29
CDC27-219ENST00000576484 TRAV36DV7A0A075B6V5 113 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 M0QZK8 103 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 UQCRQO14949 82 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 DEGS1O15121 323 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 IGHV3-30P01768 117 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 HBDP02042 147 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 CD14P08571 375 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 IGHV3-30-5P0DP03 117 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 DNAJB13P59910 316 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 BLCAPP62952 87 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 NEDD8Q15843 81 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 OCIAD2Q56VL3 154 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 OR8I2Q8N0Y5 310 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 C19orf12Q9NSK7 152 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 BOKQ9UMX3 212 aaPredicted RBP0.76□□□□□ -2.29
CDC27-219ENST00000576484 MUC4Q99102 2169 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 EML5Q05BV3 1969 aa0.76□□□□□ -2.29
CDC27-219ENST00000576484 LAMA4Q16363 1823 aa0.75□□□□□ -2.29
CDC27-219ENST00000576484 UNC13AQ9UPW8 1703 aa0.75□□□□□ -2.29
CDC27-219ENST00000576484 OVOS2A0A0G2JMS6 1433 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms