RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 LOXP28300 417 aaPredicted RBP12.08□□□□□ -0.48
SMG6-207ENST00000570756 TCTEX1D4Q5JR98 221 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 IGFL2Q6UWQ7 119 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 PRR25Q96S07 402 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 H3BMG7 143 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 ETDBQ3ZM63 59 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 GAGE13Q4V321 117 aa12.08□□□□□ -0.48
SMG6-207ENST00000570756 SPAG8Q99932 426 aaPredicted RBP12.08□□□□□ -0.48
SMG6-207ENST00000570756 TMEM8BA6NDV4 472 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 K7EIM0 57 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
SMG6-207ENST00000570756 C12orf74Q32Q52 190 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 LYPD2Q6UXB3 125 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 TTC9CQ8N5M4 171 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 FBXL15Q9H469 300 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 PIEZO2Q9H5I5 2752 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 SRSF6Q13247 344 aaKnown RBP12.07□□□□□ -0.48
SMG6-207ENST00000570756 ARPC1AQ92747 370 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 CNFNQ9BYD5 112 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 RAB1BQ9H0U4 201 aa12.07□□□□□ -0.48
SMG6-207ENST00000570756 IGHV1-3A0A0C4DH29 117 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 RAB9AP51151 201 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 CKS1BP61024 79 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 CCL17Q92583 94 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 IGKV2-40A0A087WW87 121 aaPredicted RBP12.06□□□□□ -0.48
SMG6-207ENST00000570756 IGKV2D-40P01614 121 aaPredicted RBP12.06□□□□□ -0.48
SMG6-207ENST00000570756 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 TMEM158Q8WZ71 300 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 TMEM160Q9NX00 188 aa12.06□□□□□ -0.48
SMG6-207ENST00000570756 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
SMG6-207ENST00000570756 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
SMG6-207ENST00000570756 CNIH1O95406 144 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 TMEM108Q6UXF1 575 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 HIST1H4GQ99525 98 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 CTSZQ9UBR2 303 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 RRN3P1Q2M238 152 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 Q8N8P6 123 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 CLUHP3Q96NS8 147 aa12.05□□□□□ -0.48
SMG6-207ENST00000570756 MALRD1Q5VYJ5 2156 aa12.04□□□□□ -0.48
SMG6-207ENST00000570756 NCBP2LA6PVI3 153 aaKnown RBP12.04□□□□□ -0.48
SMG6-207ENST00000570756 RNF5Q99942 180 aa12.04□□□□□ -0.48
SMG6-207ENST00000570756 KAAG1Q9UBP8 84 aa12.04□□□□□ -0.48
SMG6-207ENST00000570756 TRAV40A0A0B4J280 105 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 ORM1P02763 201 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 MRAP2Q96G30 205 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 MAP1BP46821 2468 aaKnown RBP12.03□□□□□ -0.48
SMG6-207ENST00000570756 IGLV1-47P01700 117 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 RPL7P18124 248 aaKnown RBP12.03□□□□□ -0.48
SMG6-207ENST00000570756 PLNP26678 52 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 MSRB1Q9NZV6 116 aa12.03□□□□□ -0.48
SMG6-207ENST00000570756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.02□□□□□ -0.48
SMG6-207ENST00000570756 BUB1B-PAK6H3BSN5 160 aa12.02□□□□□ -0.48
SMG6-207ENST00000570756 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.48
SMG6-207ENST00000570756 FAM27E3Q08E93 113 aa12.02□□□□□ -0.48
SMG6-207ENST00000570756 MTURNQ8N3F0 131 aa12.02□□□□□ -0.48
SMG6-207ENST00000570756 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.48
SMG6-207ENST00000570756 FAM215AQ9Y5M1 114 aa12.02□□□□□ -0.48
SMG6-207ENST00000570756 AMTNQ6UX39 209 aa12.02□□□□□ -0.49
SMG6-207ENST00000570756 RPEQ96AT9 228 aa12.02□□□□□ -0.49
SMG6-207ENST00000570756 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
SMG6-207ENST00000570756 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 LINC01619G3V211 115 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 C16orf97H3BN30 126 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 K7EMI3 77 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 C22orf34Q6ZV56 151 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 Q8TAT8 98 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 A0A1B0GWB2 263 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 APOMO95445 188 aa12.01□□□□□ -0.49
SMG6-207ENST00000570756 A0A087WX48 190 aa12□□□□□ -0.49
SMG6-207ENST00000570756 Q6ZS92 163 aa12□□□□□ -0.49
SMG6-207ENST00000570756 MRPL16Q9NX20 251 aaKnown RBP12□□□□□ -0.49
SMG6-207ENST00000570756 ITPR1Q14643 2758 aa12□□□□□ -0.49
SMG6-207ENST00000570756 TMEM238LA0A1B0GVL6 79 aa12□□□□□ -0.49
SMG6-207ENST00000570756 MFAP4P55083 255 aa12□□□□□ -0.49
SMG6-207ENST00000570756 LAGE3Q14657 143 aa12□□□□□ -0.49
SMG6-207ENST00000570756 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
SMG6-207ENST00000570756 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 Q5PR19 223 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 DTX2Q86UW9 622 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 ZNF48Q96MX3 618 aaPredicted RBP11.99□□□□□ -0.49
SMG6-207ENST00000570756 AGRNO00468 2067 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 GFRALQ6UXV0 394 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 SMG1Q96Q15 3661 aaKnown RBP11.99□□□□□ -0.49
SMG6-207ENST00000570756 ACACBO00763 2458 aa11.99□□□□□ -0.49
SMG6-207ENST00000570756 PRRG2O14669 202 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 ZNF575Q86XF7 245 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 C1QTNF4Q9BXJ3 329 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 BSNQ9UPA5 3926 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 GATA1P15976 413 aaPredicted RBP11.98□□□□□ -0.49
SMG6-207ENST00000570756 ATP5G2Q06055 141 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 SH3BGRL2Q9UJC5 107 aa11.98□□□□□ -0.49
SMG6-207ENST00000570756 PRSS47A8MTI9 375 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms