RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TWIST1Q15672 202 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 SAPCD1Q5SSQ6 148 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 CFAP161Q6P656 301 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 PRELID3AQ96N28 172 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 TMEM191AQ9H0A3 160 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 MSRB1Q9NZV6 116 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 HSPB8Q9UJY1 196 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 CENPVL3A0A0U1RRI6 287 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 NPFFO15130 113 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 BUB3O43684 328 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 ORM1P02763 201 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 PPIFP30405 207 aaKnown RBP7.76□□□□□ -1.17
LRRC28-216ENST00000559819 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 FER1L6-AS1Q8NA97 138 aa7.76□□□□□ -1.17
LRRC28-216ENST00000559819 ITLN2Q8WWU7 325 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-216ENST00000559819 GNLYP22749 145 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 FOXE3Q13461 319 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 IL17RELQ6ZVW7 336 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 ZNF747Q9BV97 191 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 ST20Q9HBF5 79 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 U3KQK5 164 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 GAS8-AS1O95177 125 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 GAGE1Q13065 139 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
LRRC28-216ENST00000559819 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 LINC01545Q5VT33 79 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 PSMG3-AS1Q96PY0 264 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 SCRT2Q9NQ03 307 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 GOSR1O95249 250 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 NPYP01303 97 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 TCTAP57738 103 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 BRD3OSQ6XYD6 125 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 C5orf56Q8N8D9 126 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
LRRC28-216ENST00000559819 TRAV8-2A0A0B4J237 113 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 HSBP1L1C9JCN9 74 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 IGHV4-39P01824 125 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 BMI1P35226 326 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 Q6ZQT7 251 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 ERASQ7Z444 233 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 SNAI2O43623 268 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 CKS2P33552 79 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 SLC25A34Q6PIV7 304 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 WFDC3Q8IUB2 231 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 EEF1AKMT3Q96AZ1 226 aa7.73□□□□□ -1.17
LRRC28-216ENST00000559819 A0A087X0K7 114 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 TCF21O43680 179 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
LRRC28-216ENST00000559819 DMRTA1Q5VZB9 504 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 RNF185Q96GF1 192 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 AGPAT4-IT1Q9H0P7 198 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 C11orf21Q9P2W6 132 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 FABP5P3A8MUU1 101 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 ITPR1Q14643 2758 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 GATA1P15976 413 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-216ENST00000559819 KLK9Q2XQG4 91 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 KLK9Q9UKQ9 250 aa7.72□□□□□ -1.17
LRRC28-216ENST00000559819 IGKV3D-20A0A0C4DH25 116 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
LRRC28-216ENST00000559819 NUDT3O95989 172 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 EVI2AP22794 236 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 ATP5G2Q06055 141 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 PAX8Q06710 450 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 METTL26Q96S19 204 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 PRORYQ9H606 182 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 ABCA2Q9BZC7 2435 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 TRAV41A0A0B4J266 112 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 TRAV40A0A0B4J280 105 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV4-61A0A0C4DH41 118 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 CACNG7P62955 275 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 LY6EQ16553 131 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 PIFOQ8TCI5 191 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 COX11Q9Y6N1 276 aa7.71□□□□□ -1.18
LRRC28-216ENST00000559819 LINC01559Q495D7 138 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 SLC50A1Q9BRV3 221 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 MOB4Q9Y3A3 225 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 SELENOKQ9Y6D0 94 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 CCL25O15444 150 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 TRGV3P03979 118 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 S100A7P31151 101 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 BVES-AS1Q5T3Y7 98 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 ORAOV1Q8WV07 137 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 MS4A6AQ9H2W1 248 aa7.7□□□□□ -1.18
LRRC28-216ENST00000559819 J3KRW8 73 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 HBDP02042 147 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 IGHV4-38-2P0DP08 117 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 RAB9AP51151 201 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 DEFB1P60022 68 aa7.69□□□□□ -1.18
LRRC28-216ENST00000559819 SRSF2Q01130 221 aaKnown RBP7.69□□□□□ -1.18
LRRC28-216ENST00000559819 C18orf15Q96N68 181 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms