RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SOGA1O94964 1423 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 ADGRL3Q9HAR2 1447 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 C5orf58C9J3I9 102 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 CETN3O15182 167 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 IFNA14P01570 189 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 NMBP08949 121 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 CEBPGP53567 150 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 SPA17Q15506 151 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 TCTEX1D1Q8N7M0 179 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 TMEM229BQ8NBD8 167 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 OR10X1Q8NGY0 326 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 OR5AK2Q8NH90 309 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 ASB4Q9Y574 426 aa-0.69□□□□□ -2.52
SNX6-204ENST00000555541 TRAV5A0A0B4J249 113 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 A0A0G2JMM0 328 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 ARL5CA6NH57 179 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 C9JAW5 83 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 MCRIP1C9JLW8 97 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 H7BYZ3 331 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 TPST1O60507 370 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 CST7O76096 145 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 IGF2P01344 180 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 TRGC2P03986 189 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 CAPZBP47756 277 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 NCALDP61601 193 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 POU6F1Q14863 301 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 IQCJQ1A5X6 159 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 LIN52Q52LA3 116 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 Q5XG85 94 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 CIB3Q96Q77 187 aaPredicted RBP-0.7□□□□□ -2.52
SNX6-204ENST00000555541 COMMD3Q9UBI1 195 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 CHD9Q3L8U1 2897 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 MYLKQ15746 1914 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 MYO7AQ13402 2215 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 BSNQ9UPA5 3926 aa-0.7□□□□□ -2.52
SNX6-204ENST00000555541 CTTNBP2Q8WZ74 1663 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 TMEM30CPA0ZSE6 113 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 NDUFC2O95298 119 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 TRACP01848 142 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 IL7P13232 177 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 FABP4P15090 132 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 HBBP68871 147 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 MRPS36P82909 103 aaKnown RBP-0.71□□□□□ -2.52
SNX6-204ENST00000555541 IZUMO2Q6UXV1 221 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 OR8J2Q8NGG1 315 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 NEK7Q8TDX7 302 aa-0.71□□□□□ -2.52
SNX6-204ENST00000555541 NUP98P52948 1817 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 IGKCP01834 107 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 C1QBP02746 253 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 OGNP20774 298 aaKnown RBP-0.72□□□□□ -2.52
SNX6-204ENST00000555541 RPL35P42766 123 aaKnown RBP-0.72□□□□□ -2.52
SNX6-204ENST00000555541 NDUFA6P56556 154 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 LSM6P62312 80 aaKnown RBP-0.72□□□□□ -2.52
SNX6-204ENST00000555541 SCGB2B2Q4G0G5 96 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 OR8J3Q8NGG0 315 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 GPX7Q96SL4 187 aaPredicted RBP-0.72□□□□□ -2.52
SNX6-204ENST00000555541 BPESC1Q9GZL8 116 aa-0.72□□□□□ -2.52
SNX6-204ENST00000555541 HERC1Q15751 4861 aa-0.72□□□□□ -2.53
SNX6-204ENST00000555541 FRMPD1Q5SYB0 1578 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 LAMC3Q9Y6N6 1575 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 AKAP6Q13023 2319 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 RIIAD1A6NNX1 92 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 TMEM114B3SHH9 223 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 G3V2T6 193 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 AIPO00170 330 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 APOA2P02652 100 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 DEFB109BQ30KR1 87 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 FKBP1CQ5VVH2 108 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 LYPD5Q6UWN5 251 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 OR4B1Q8NGF8 309 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 DMAC1Q96GE9 116 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 PAIP2Q9BPZ3 127 aaKnown RBP-0.73□□□□□ -2.53
SNX6-204ENST00000555541 C9orf16Q9BUW7 83 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 ATG5Q9H1Y0 275 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 COA4Q9NYJ1 87 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 TANC1Q9C0D5 1861 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 NCAPD3P42695 1498 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 APC2O95996 2303 aa-0.73□□□□□ -2.53
SNX6-204ENST00000555541 NISCHQ9Y2I1 1504 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 CADP27708 2225 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 PRM1P04553 51 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 CCKP06307 115 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 BCL2P10415 239 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 DNAJB13P59910 316 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 HSPE1P61604 102 aaKnown RBP-0.74□□□□□ -2.53
SNX6-204ENST00000555541 GNG5P63218 68 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 C1orf140Q5VVS0 124 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 CROCCP2Q86T23 111 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 CLEC2BQ92478 149 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 PPP1R14BQ96C90 147 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 TMEM141Q96I45 108 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 CFAP53Q96M91 514 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 MCEEQ96PE7 176 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 OR2H1Q9GZK4 316 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 PTPRQQ9UMZ3 2332 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 KIF1BO60333 1816 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 DCHS2Q6V1P9 2916 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 ZFYVE9O95405 1425 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 FGD6Q6ZV73 1430 aa-0.74□□□□□ -2.53
SNX6-204ENST00000555541 TMEM189A5PLL7 270 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms