RNA–Protein interactions for RNA: ENST00000555047.1

APAF1-213, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-213ENST00000555047 LINC00305Q7Z4B0 112 aa0.91□□□□□ -2.26
APAF1-213ENST00000555047 RMND5BQ96G75 393 aaPredicted RBP0.91□□□□□ -2.26
APAF1-213ENST00000555047 TAF9BQ9HBM6 251 aa0.91□□□□□ -2.26
APAF1-213ENST00000555047 ZNF469Q96JG9 3925 aaPredicted RBP0.9□□□□□ -2.26
APAF1-213ENST00000555047 TRAV23DV6A0A075B6W5 121 aa0.9□□□□□ -2.27
APAF1-213ENST00000555047 POLR2HP52434 150 aaKnown RBP0.9□□□□□ -2.27
APAF1-213ENST00000555047 MAXP61244 160 aa0.9□□□□□ -2.27
APAF1-213ENST00000555047 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
APAF1-213ENST00000555047 CASC2Q6XLA1 102 aa0.9□□□□□ -2.27
APAF1-213ENST00000555047 BOKQ9UMX3 212 aaPredicted RBP0.9□□□□□ -2.27
APAF1-213ENST00000555047 FBN2P35556 2912 aa0.9□□□□□ -2.27
APAF1-213ENST00000555047 BCL9O00512 1426 aa0.89□□□□□ -2.27
APAF1-213ENST00000555047 TCOF1Q13428 1488 aaKnown RBP0.89□□□□□ -2.27
APAF1-213ENST00000555047 A6NN06 94 aa0.89□□□□□ -2.27
APAF1-213ENST00000555047 TMEM128Q5BJH2 165 aa0.89□□□□□ -2.27
APAF1-213ENST00000555047 CITO14578 2027 aa0.89□□□□□ -2.27
APAF1-213ENST00000555047 FANCMQ8IYD8 2048 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 TRAV13-1A0A0B4J241 112 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 H3BMG7 143 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 LSM3P62310 102 aaKnown RBP0.88□□□□□ -2.27
APAF1-213ENST00000555047 CCSMST1Q4G0I0 132 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 ZCCHC23Q6ZST2 131 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 MORN4Q8NDC4 146 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 CLEC2BQ92478 149 aa0.88□□□□□ -2.27
APAF1-213ENST00000555047 CIB3Q96Q77 187 aaPredicted RBP0.88□□□□□ -2.27
APAF1-213ENST00000555047 LOC107986453A0A1B0GWG9 222 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 IGHV3-30P01768 117 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 CD14P08571 375 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 IGHV3-30-5P0DP03 117 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 PDE6GP18545 87 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 FOXA3P55318 350 aaPredicted RBP0.87□□□□□ -2.27
APAF1-213ENST00000555047 OCIAD2Q56VL3 154 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 SAMD13Q5VXD3 122 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 HRCT1Q6UXD1 115 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 IZUMO2Q6UXV1 221 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 SKA2Q8WVK7 121 aaPredicted RBP0.87□□□□□ -2.27
APAF1-213ENST00000555047 DLC1Q96QB1 1528 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 PTPRDP23468 1912 aa0.87□□□□□ -2.27
APAF1-213ENST00000555047 A2MP01023 1474 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.86□□□□□ -2.27
APAF1-213ENST00000555047 C3orf85A0A1B0GTC6 90 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 PRORSD1PA6NEY8 169 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 S100GP29377 79 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 FXYD4P59646 89 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 ATOH7Q8N100 152 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 C10orf111Q8N326 155 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 AP1S3Q96PC3 154 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 MUC4Q99102 2169 aa0.86□□□□□ -2.27
APAF1-213ENST00000555047 ZFC3H1O60293 1989 aaKnown RBP0.85□□□□□ -2.27
APAF1-213ENST00000555047 TSTD3H0UI37 97 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 RPL7P18124 248 aaKnown RBP0.85□□□□□ -2.27
APAF1-213ENST00000555047 DNAJB13P59910 316 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 NEDD8Q15843 81 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 C5orf17Q8NAS9 161 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 TMEM229BQ8NBD8 167 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 TMEM35BQ8NCS4 154 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 CCDC115Q96NT0 180 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 CBLN4Q9NTU7 201 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 MPC1Q9Y5U8 109 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 ZDBF2Q9HCK1 2354 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 TANC2Q9HCD6 1990 aa0.85□□□□□ -2.27
APAF1-213ENST00000555047 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 LOC107984640A0A0U1RRK4 108 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 ARL5CA6NH57 179 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 ZNF727A8MUV8 499 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 K7EIL1 84 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 SULT1C4O75897 302 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 SPTBP11277 2137 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 CRYGSP22914 178 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 B2MP61769 119 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 RPS28P62857 69 aaKnown RBP0.84□□□□□ -2.27
APAF1-213ENST00000555047 SPINK9Q5DT21 86 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 Q6ZQY7 126 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 TEX29Q8N6K0 151 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 TCTEX1D1Q8N7M0 179 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 OR5A2Q8NGI9 324 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 NAT14Q8WUY8 206 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 NABP2Q9BQ15 211 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 NIT2Q9NQR4 276 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 C19orf12Q9NSK7 152 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 TRAPPC2LQ9UL33 140 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 HSPB11Q9Y547 144 aa0.84□□□□□ -2.27
APAF1-213ENST00000555047 FAM135BQ49AJ0 1406 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 IFITM5A6NNB3 132 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 GYPBP06028 91 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 RPL22P35268 128 aaKnown RBP0.83□□□□□ -2.28
APAF1-213ENST00000555047 ETV6P41212 452 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 LIMD2Q9BT23 127 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 SPANXA1Q9NS26 97 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 NDUFAF1Q9Y375 327 aa0.83□□□□□ -2.28
APAF1-213ENST00000555047 USP54Q70EL1 1684 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 GNG14A0A1W2PPG7 69 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 BBIP1A8MTZ0 92 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 H0YJX3 145 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 CCL4P13236 92 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 RPS3P23396 243 aaKnown RBP eCLIP0.82□□□□□ -2.28
APAF1-213ENST00000555047 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
APAF1-213ENST00000555047 ASB16-AS1Q495Z4 193 aa0.82□□□□□ -2.28
APAF1-213ENST00000555047 OR51A4Q8NGJ6 313 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms