RNA–Protein interactions for RNA: ENST00000555047.1

APAF1-213, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 5

Gene APAF1, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-213ENST00000555047 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
APAF1-213ENST00000555047 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
APAF1-213ENST00000555047 SENP3Q9H4L4 574 aaPredicted RBP19.7■□□□□ 0.74
APAF1-213ENST00000555047 PHF23Q9BUL5 403 aaPredicted RBP19.62■□□□□ 0.73
APAF1-213ENST00000555047 FOXD1Q16676 465 aa18.3■□□□□ 0.52
APAF1-213ENST00000555047 PLPPR3Q6T4P5 718 aa18.05■□□□□ 0.48
APAF1-213ENST00000555047 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
APAF1-213ENST00000555047 ADRA2BP18089 450 aa17.4■□□□□ 0.38
APAF1-213ENST00000555047 PIAS4Q8N2W9 510 aaPredicted RBP17.22■□□□□ 0.35
APAF1-213ENST00000555047 MSH5O43196 834 aa16.99■□□□□ 0.31
APAF1-213ENST00000555047 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
APAF1-213ENST00000555047 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
APAF1-213ENST00000555047 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
APAF1-213ENST00000555047 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
APAF1-213ENST00000555047 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
APAF1-213ENST00000555047 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
APAF1-213ENST00000555047 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
APAF1-213ENST00000555047 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
APAF1-213ENST00000555047 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
APAF1-213ENST00000555047 KCNA4P22459 653 aa15.21■□□□□ 0.03
APAF1-213ENST00000555047 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
APAF1-213ENST00000555047 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
APAF1-213ENST00000555047 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
APAF1-213ENST00000555047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
APAF1-213ENST00000555047 RNF39Q9H2S5 420 aa14.52□□□□□ -0.09
APAF1-213ENST00000555047 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
APAF1-213ENST00000555047 CACNB1Q02641 598 aaPredicted RBP14.38□□□□□ -0.11
APAF1-213ENST00000555047 SLC4A2P04920 1241 aa14.36□□□□□ -0.11
APAF1-213ENST00000555047 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
APAF1-213ENST00000555047 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
APAF1-213ENST00000555047 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
APAF1-213ENST00000555047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
APAF1-213ENST00000555047 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
APAF1-213ENST00000555047 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
APAF1-213ENST00000555047 ZBTB22O15209 634 aa13.97□□□□□ -0.17
APAF1-213ENST00000555047 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
APAF1-213ENST00000555047 SPINK5Q9NQ38 1064 aaPredicted RBP13.96□□□□□ -0.17
APAF1-213ENST00000555047 CAPN15O75808 1086 aa13.95□□□□□ -0.18
APAF1-213ENST00000555047 APLP2Q06481 763 aa13.94□□□□□ -0.18
APAF1-213ENST00000555047 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
APAF1-213ENST00000555047 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
APAF1-213ENST00000555047 EHMT2Q96KQ7 1210 aa13.77□□□□□ -0.21
APAF1-213ENST00000555047 DSG3P32926 999 aa13.73□□□□□ -0.21
APAF1-213ENST00000555047 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
APAF1-213ENST00000555047 ABCB7O75027 752 aa13.65□□□□□ -0.22
APAF1-213ENST00000555047 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
APAF1-213ENST00000555047 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
APAF1-213ENST00000555047 POLA2Q14181 598 aa13.52□□□□□ -0.25
APAF1-213ENST00000555047 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
APAF1-213ENST00000555047 FBLN2P98095 1184 aa13.13□□□□□ -0.31
APAF1-213ENST00000555047 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
APAF1-213ENST00000555047 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
APAF1-213ENST00000555047 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
APAF1-213ENST00000555047 AKT1S1Q96B36 256 aa12.89□□□□□ -0.35
APAF1-213ENST00000555047 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
APAF1-213ENST00000555047 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
APAF1-213ENST00000555047 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
APAF1-213ENST00000555047 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
APAF1-213ENST00000555047 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
APAF1-213ENST00000555047 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
APAF1-213ENST00000555047 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
APAF1-213ENST00000555047 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
APAF1-213ENST00000555047 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
APAF1-213ENST00000555047 PITPNM1O00562 1244 aa12.62□□□□□ -0.39
APAF1-213ENST00000555047 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
APAF1-213ENST00000555047 POTEHQ6S545 545 aa12.57□□□□□ -0.4
APAF1-213ENST00000555047 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
APAF1-213ENST00000555047 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
APAF1-213ENST00000555047 FXR2P51116 673 aaKnown RBP eCLIP12.42□□□□□ -0.42
APAF1-213ENST00000555047 FKBP8Q14318 412 aa12.42□□□□□ -0.42
APAF1-213ENST00000555047 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
APAF1-213ENST00000555047 STAG3Q9UJ98 1225 aa12.37□□□□□ -0.43
APAF1-213ENST00000555047 PROM2Q8N271 834 aa12.34□□□□□ -0.43
APAF1-213ENST00000555047 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
APAF1-213ENST00000555047 CHADLQ6NUI6 762 aa12.26□□□□□ -0.45
APAF1-213ENST00000555047 HAX1O00165 279 aa12.15□□□□□ -0.46
APAF1-213ENST00000555047 CREBZFQ9NS37 354 aa12.15□□□□□ -0.46
APAF1-213ENST00000555047 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
APAF1-213ENST00000555047 MIER1Q8N108 512 aa12.05□□□□□ -0.48
APAF1-213ENST00000555047 FBXO3Q9UK99 471 aa12.05□□□□□ -0.48
APAF1-213ENST00000555047 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
APAF1-213ENST00000555047 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
APAF1-213ENST00000555047 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
APAF1-213ENST00000555047 EVX2Q03828 476 aa11.99□□□□□ -0.49
APAF1-213ENST00000555047 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
APAF1-213ENST00000555047 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
APAF1-213ENST00000555047 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
APAF1-213ENST00000555047 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
APAF1-213ENST00000555047 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
APAF1-213ENST00000555047 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
APAF1-213ENST00000555047 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
APAF1-213ENST00000555047 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
APAF1-213ENST00000555047 KLHL34Q8N239 644 aa11.79□□□□□ -0.52
APAF1-213ENST00000555047 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
APAF1-213ENST00000555047 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
APAF1-213ENST00000555047 GABBR2O75899 941 aa11.75□□□□□ -0.53
APAF1-213ENST00000555047 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
APAF1-213ENST00000555047 NUBP1P53384 320 aa11.72□□□□□ -0.53
APAF1-213ENST00000555047 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
APAF1-213ENST00000555047 CLCN6P51797 869 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms